Log - d9933ebd8f768f34317c3ee153da9e350601ab36 - hyracks

df811e5 add SymmetryChecker by Anbang Xu · 12 years ago
6c79239 add AAA testcase by Anbang Xu · 12 years ago
ac2e96e fix graphviz in mac OS by Anbang Xu · 12 years ago
4c416ff Delete isFakeVertex() check by Anbang Xu · 12 years ago
3475209 Extract method name and make it meaningful by Anbang Xu · 12 years ago
8fa9d09 P1 pass all the test. P1 should be correct one and can be used to do comparison by Anbang Xu · 12 years ago
9a70cf3 Add dirMapper to mapKey in P1 by Anbang Xu · 12 years ago
11558a0 P1 pass test, except head_7(which has multiple updates) by Anbang Xu · 12 years ago
4bb7716 add testcase for P1 by Anbang Xu · 12 years ago
99ea1c4 Clean up code by Anbang Xu · 12 years ago
6a47868 Fix P1 by Anbang Xu · 12 years ago
aa74657 P1 pass testcase in which #pathnode is even by Anbang Xu · 12 years ago
f577a66 Exclude FakeVertex in ouput format by Anbang Xu · 12 years ago
1a7bc8b Fix a bug in sendUpdateMsg(). setMergeDir should be in the front of sendUpdateMsg by Anbang Xu · 12 years ago
64bb87e Add EdgeList.unionAdd(EdgeList) by Anbang Xu · 12 years ago
eebeaf8 add isFlip to MessageFlag by Anbang Xu · 12 years ago
6744c68 Add updateMsg to P1, P1 need to deal with the case in which #pathnode is even by Anbang Xu · 12 years ago
b8c534c Clean up some old P1 code by Anbang Xu · 12 years ago
cca4428 Override the reduce function typically for P1 by Anbang Xu · 12 years ago
6c063e3 Adapt new broadcastMergeMsg by Anbang Xu · 12 years ago
0b163b0 add boolean flag to broadcastKillself. may deley killSelf by Anbang Xu · 12 years ago
d7fb5ef fixing P1 by Anbang Xu · 12 years ago
cc1135b change addEdge to unionEdge in update by Anbang Xu · 12 years ago
4b21369 Fix TandemRepeatAndCycle bug by Anbang Xu · 12 years ago
3e91447 add test case for tandem repeats with multiple self-edges by Jake Biesinger · 12 years ago
5ecb66f seperate MessageFlag and State by Anbang Xu · 12 years ago
016d7ff Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by Anbang Xu · 12 years ago
7e8075b correct the input format for P2 by Anbang Xu · 12 years ago
8c9ed0f update driver to use P2's custom input and outputformat classes by Jake Biesinger · 12 years ago
016c6f4 add P2GraphInputFormat by Anbang Xu · 12 years ago
67ae8ad ADD more testcases for pathmerge by Anbang Xu · 12 years ago
63e5756 add lock to fakenode exist check by Anbang Xu · 12 years ago
db7f854 clean up useless code by Anbang Xu · 12 years ago
e830955 Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by Anbang Xu · 12 years ago
385dca4 Add sychnized lock to P2 to avoid duplicate fake nodes by Anbang Xu · 12 years ago
24f2ead add boolean flag to switch method between P2 and P4 by Anbang Xu · 12 years ago
2acd0b6 Fix one bug in P2/P4 by Anbang Xu · 12 years ago
ae62ffe P2 pass all the tests except cycle by Anbang Xu · 12 years ago
027051e Add flag to notice apex to updateEdge by Anbang Xu · 12 years ago
e3d4c1a Succeed to apply apexMap by Anbang Xu · 12 years ago
20a03b1 add kmerAndDirWritable by Anbang Xu · 12 years ago
6485489 Final Vertex Has correct edgelist by Anbang Xu · 12 years ago
fad0703 going to use different rules to identify head by Anbang Xu · 12 years ago
9de0ad3 P2 pass single tests by Anbang Xu · 12 years ago
14d58f0 remove sendOutUpdate for head(P2 debug) by Anbang Xu · 12 years ago
a7405c1 add should merge dir to state by Anbang Xu · 12 years ago
522b5ff Change update condition by Anbang Xu · 12 years ago
39b490b change updateEdges for processUpdate in pathmerge by Anbang Xu · 12 years ago
d429aee revert to previous initVertex behavior by Jake Biesinger · 12 years ago
99d5629 Fix a bug in configure isFlip by Anbang Xu · 12 years ago
7da37db P2 internalKmer merge is completed in single path test by Anbang Xu · 12 years ago
3d9ecc5 p2 pass test 2,3 by Anbang Xu · 12 years ago
129879d add getVertexValue in P2value type by Anbang Xu · 12 years ago
d5f760c add p2 graph input format, initiate prependMergeNode and appendMergeNode by Anbang Xu · 12 years ago
188c182 add processP2Merge to P2, P2 need a specific merge method by Anbang Xu · 12 years ago
dd52a40 add getMessageType and getMergeNode to P2Message by Anbang Xu · 12 years ago
d94f456 using prependNode and appendNode instead of LinkedList of mergeNodes by Anbang Xu · 12 years ago
1f85b15 add parameter(mergeDest) to configureMergeMsgToNeighber by Anbang Xu · 12 years ago
5983e8b add P2ValueWritable and P2MessageWritable to P2 by Anbang Xu · 12 years ago
065eec8 Clean up io folder by Anbang Xu · 12 years ago
362358f seperate io folder to io.common and io.message by Anbang Xu · 12 years ago
183807a add GraphCleanVertexInputFormat and GraphCleanVertexOutputFormat by Anbang Xu · 12 years ago
eb09388 Adapt all clean patterns to use subclass V by Anbang Xu · 12 years ago
e0dff62 add MessageType class to store msg type from head by Anbang Xu · 12 years ago
01c5e31 add subclass V to extend VertexValueWritable by Anbang Xu · 12 years ago
d4b0267 refactor newState to state, there is no new state by Anbang Xu · 12 years ago
d488e98 refactor MessageTypeFromHead to MessageType(P2) by Anbang Xu · 12 years ago
7616083 add only old head update edges by Anbang Xu · 12 years ago
9bbef65 make name more readable, refactor setPredecessorMsg to setPredecessorToMeDir by Anbang Xu · 12 years ago
f5e5816 override sendUpdateMsg without parameter by Anbang Xu · 12 years ago
38db5c3 add linkedListWritable for P2 by Anbang Xu · 12 years ago
36fb2e2 Merge with main brnach by Anbang Xu · 12 years ago
f3e0fc6 only set kmerLength during first superstep in basicGraphCleanVertex by Jake Biesinger · 12 years ago
76e2d7f don't read global state during compute iterations by Jake Biesinger · 12 years ago
8f6b461 refactor pregelix job creation by Anbang Xu · 12 years ago
5cda522 format test case by Anbang Xu · 12 years ago
2246913 Small change by Anbang Xu · 12 years ago
a90fdd9 update pregelix vertexes to initialize static values by Jake Biesinger · 12 years ago
a1b1e45 add simple command to each pattern by Anbang Xu · 12 years ago
86edb32 change command for scaffolding by Anbang Xu · 12 years ago
423fd16 Fix all synchronization issues by Anbang Xu · 12 years ago
81833a0 add scaffoldingAggregator by Anbang Xu · 12 years ago
ee7dac3 Add synchronization to static variable by Anbang Xu · 12 years ago
7a47e8b Begin to debug P2 by Anbang Xu · 12 years ago
4da15b2 add many similar bubbles in one pattern test case and BubbleMerge pass test by Anbang Xu · 12 years ago
a9c60b3 The aggregator for all the patterns are completed by Anbang Xu · 12 years ago
1aed014 add statistics counters to removeTip, pathMerge, removeBridge by Anbang Xu · 12 years ago
7f2208f PathMerge aggregator is completed by Anbang Xu · 12 years ago
52a279f Aggregator passes test by Anbang Xu · 12 years ago
b1c7809 testing by Anbang Xu · 12 years ago
f3a548c move aggregator output to test by Anbang Xu · 12 years ago
ca28b1b add StatisticsCounterAggregator by Anbang Xu · 12 years ago
8c187a6 add RandonWalk test case by Anbang Xu · 12 years ago
e71a964 Unroll Repeat pass test by Anbang Xu · 12 years ago
17b99f2 add stop haltNode in pathmerge and fix the bug Jake mentioned by Anbang Xu · 12 years ago
39cfc58 add synthetic test case by Jake Biesinger · 12 years ago
9dec13e remove generated genomix-pregel test case xml files by Jake Biesinger · 12 years ago
c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago