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asterix-gerrit.ics.uci.edu / hyracks / 50e9f8614b4124288f606d90c3417caa2b5f80de / genomix / genomix-hyracks / src
  1. 1259632 refactor KmerList -> VKmerList by Jake Biesinger · 12 years ago
  2. ceab4c1 Merge branch 'wbiesing/genomix/VKmers' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  3. 071ec27 modify the test parameter by Nan Zhang · 12 years ago
  4. 8379d7f add the read checker for hyracks by Nan Zhang · 12 years ago
  5. e90120f modify the test for graph building by Nan Zhang · 12 years ago
  6. 5a69e16 refactor graph building in hyracks using new genomix-data code by Nan Zhang · 12 years ago
  7. f2507bf debugging for hyracks by Nan Zhang · 12 years ago
  8. 8cea7fd new graph job built by Nan Zhang · 12 years ago
  9. 5b40242 build graph building job for hyracks by Nan Zhang · 12 years ago
  10. 0f33ece use new genomix-data by Nan Zhang · 12 years ago
  11. be0a038 modify the jobGeBrujinGraph by Nan Zhang · 12 years ago
  12. 3a0b4f2 fix key-value parser bug by Nan Zhang · 12 years ago
  13. a660b8b merge aggregater completes by Nan Zhang · 12 years ago
  14. 9b2c8b6 job generate frame complete by Nan Zhang · 12 years ago
  15. b811143 Refactor KmerBytesWritable to use internal length by Jake Biesinger · 12 years ago
  16. d8d3ccc local aggregator completed by Nan Zhang · 12 years ago
  17. 73ba093 delete the contrail package by Nan Zhang · 12 years ago
  18. ad0a538 complete the dataflow of hyracks by Nan Zhang · 12 years ago
  19. 4d50d8a Merge branch 'genomix/fullstack_genomix' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  20. 95138a4 hyracks contrail graph building partial completing by Nan Zhang · 12 years ago
  21. 0c644f4 Mapper passes test by Anbang Xu · 12 years ago
  22. b14e7e6 Update for changing graph by Anbang Xu · 12 years ago
  23. 8dbe728 refactor 'size' to 'kmerByteSize' in KmerBytesWritable by Anbang Xu · 12 years ago
  24. f7fc945 refactor 'UniqueKey' to 'NodeId' by Anbang Xu · 12 years ago
  25. 6350b0f some changes in ParserFactory by Anbang Xu · 12 years ago
  26. 1a02870 add ReadsKeyValueParserFactory for new graph using for read HDFS by Anbang Xu · 12 years ago
  27. 871743c add IntermediateNodeWritable and KmerListWritable by Anbang Xu · 12 years ago
  28. c642eeb new graph driver by Anbang Xu · 12 years ago
  29. 970c74f move old key/value class to oldtype folder by Anbang Xu · 12 years ago
  30. acde177 add unmerged option in hyracks graph building by Jianfeng Jia · 12 years ago
  31. bc7e15f Merge branch 'genomix/fullstack_genomix' into jianfeng/genomix by Jianfeng Jia · 12 years ago
  32. 0e69045 change iterator to for loop to save time. by Jianfeng Jia · 12 years ago
  33. bf8f525 Fix spelling by Jake Biesinger · 12 years ago
  34. c49f7b9 add warning of huge overlap by Jianfeng Jia · 12 years ago
  35. 471f75c remove the "new" block. by Jianfeng Jia · 12 years ago
  36. eb8d72a Merge commit '951870ef4642f2003c4240eeef702fc90600fe77' into nanzhang/genomix by Nan Zhang · 12 years ago
  37. 3a26a3a merge with jianfeng-reverse by Nan Zhang · 12 years ago
  38. a591f26 clean up code and add copyright header by JavierJia · 12 years ago
  39. bf9401e increase default frameSize to 128K by Jianfeng Jia · 12 years ago
  40. 8040709 add log to watch the tuple size by Jianfeng Jia · 12 years ago
  41. 12b4280 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  42. 5ba19e2 add more information for larger data debug by Jianfeng Jia · 12 years ago genomix/unidirection
  43. 8a50889 fix outputKmerFactory racing problem by Jianfeng Jia · 12 years ago
  44. 33dc862 fix debugNc script by JavierJia · 12 years ago
  45. dba2ebf Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  46. 22616cf fixed the racing problem by Jianfeng Jia · 12 years ago
  47. 763ee99 fix builder.reset bug by JavierJia · 12 years ago
  48. aa985fe Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  49. 1f37dce fix builder.reset bug by JavierJia · 12 years ago
  50. 1d7de64 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  51. 1be1d3e fix binary format test by JavierJia · 12 years ago
  52. f6640db Passed test by Jianfeng Jia · 12 years ago
  53. 562116a finished framework. not test yet by Jianfeng Jia · 12 years ago
  54. 8528899 finish framework by Jianfeng Jia · 12 years ago
  55. f14c403 add mergeNext function to kmerWritable by Jianfeng Jia · 12 years ago
  56. 7636684 refine the logic of generate Node by Jianfeng Jia · 12 years ago
  57. 529a089 finished EndToEnd test by Jianfeng Jia · 12 years ago
  58. 9804780 passed readid groupby test by Jianfeng Jia · 12 years ago
  59. 80b312a passed map kmer to readid operator by Jianfeng Jia · 12 years ago
  60. c2bb663 passed kmer groupby test by Jianfeng Jia · 12 years ago
  61. c5172dd reformat JobGen to avoid NonSerializable exception by Jianfeng Jia · 12 years ago
  62. ee2e038 finished test framework by JavierJia · 12 years ago
  63. 6b5f7a2 update the test to genomix-hyracks by JavierJia · 12 years ago
  64. 1d11e0a finish position test by JavierJia · 12 years ago
  65. 5d192ad finished genomix-hyracks end to end by JavierJia · 12 years ago
  66. e85c8a7 merge with hadoop code by JavierJia · 12 years ago
  67. fe1391a passed genomix-data test by JavierJia · 12 years ago
  68. ba0d0d8 clean up kmerWritable by JavierJia · 12 years ago
  69. d158252 finish design of NodeReferenc API by JavierJia · 12 years ago
  70. 4c33a7a finished framework by JavierJia · 12 years ago
  71. 136c411 finish mapKmerToReadID by JavierJia · 12 years ago
  72. d061bf1 make hyracks test pass by JavierJia · 12 years ago
  73. 950d05e add more testcase by AnbangX · 12 years ago
  74. 4803aea compatible with invalid read by Jianfeng Jia · 12 years ago
  75. 3c3f2b7 Change return value of shiftKmer from bitmap to genecode by JavierJia · 12 years ago
  76. 6050d12 export JAVA_HOME in script while by JavierJia · 12 years ago
  77. 5393870 change script of starting hyracks by jianfeng · 12 years ago
  78. 0a7f115 make genomix-hyracks pass the test by JavierJia · 12 years ago
  79. 0c37dd0 make genomix-hadoop genomix-hyracks compilable by JavierJia · 12 years ago
  80. 3e9c53e make genomix-hyracks test compilable by JavierJia · 12 years ago
  81. 3649da5 make genomix compile by buyingyi · 12 years ago
  82. 3c5bd0a make genomix compile with merged hyracks by buyingyi · 12 years ago
  83. cdc5917 upload the graph of the test case by anbangx · 12 years ago
  84. d5b6dc7 add reversed kmer option by jianfeng.jia@gmail.com · 12 years ago
  85. deb06a3 add -result-ip-address to script by jianfeng.jia@gmail.com · 12 years ago
  86. 3e17969 rewrite the DistributeAggeregator to not inherite from local by jianfeng.jia@gmail.com · 12 years ago
  87. d29097f fix typo in hash function by jianfeng.jia@gmail.com · 12 years ago
  88. 04f520c simplify logic of normalization by jianfeng.jia@gmail.com · 12 years ago
  89. e1f8249 fix normalized comparator by jianfeng.jia@gmail.com · 12 years ago
  90. 904f363 refactor the kmer hash/partition/normarlized code by jianfeng.jia@gmail.com · 12 years ago
  91. 2fc704b fix comparator bug in VLongKmer by jianfeng.jia@gmail.com · 12 years ago
  92. 3ca6098 svn merge -r2972:3096 https://hyracks.googlecode.com/svn/branches/fullstack_asterix_stabilization by jianfeng.jia@gmail.com · 12 years ago
  93. 722dbb1 rebalance the partition by jianfeng.jia@gmail.com · 12 years ago
  94. 178b3e3 move negative handler back to partition by jianfeng.jia@gmail.com · 12 years ago
  95. 99e3c26 move the negative handler into the hashBytes() method by jianfeng.jia@gmail.com · 12 years ago
  96. 4f9bf96 change hash function by jianfeng.jia@gmail.com · 12 years ago
  97. 1186d5c change hash function by jianfeng.jia@gmail.com · 12 years ago
  98. 6ed83cb fix sequecefile.reader problem by jianfeng.jia@gmail.com · 12 years ago
  99. 7b6a3c7 change to genomix-data by jianfeng.jia@gmail.com · 12 years ago
  100. 8b059c0 split the genomix-core into genomix-core and genomix-hyracks by jianfeng.jia@gmail.com · 12 years ago