blob: a6dff128672830cd07ad413f130f79cab3dabd76 [file] [log] [blame]
CAA {[{AAT:[20]}, {AAC:[5]}] [] [] [{AAT:[19]}, {AAC:[4,5,6]}, {TCA:[18,19,20]}, {GCA:[5,6]}] {5':[], ~5':[]} 7.0x}
TAA {[{AAG:[34]}, {AAT:[26]}] [] [{TAA:[33,34,35]}] [{AAT:[27]}, {GTA:[26,27,28]}, {AAG:[33,34,35]}] {5':[], ~5':[(28-0_0)]} 9.0x}
CCA {[{CAC:[37]}] [] [] [{GCC:[11,12]}, {CAG:[11,12,13]}] {5':[(37-0_0)], ~5':[]} 4.0x}
TCA {[{CAC:[23]}, {CAA:[18,20]}, {CAG:[7]}] [{ATG:[29,30,31]}] [{GAC:[28,29,30,31,32]}, {GAA:[7,8,18,19,22,23,24]}] [{CAC:[22]}, {CAA:[19]}, {CAG:[6,8]}] {5':[(20-0_0)], ~5':[(24-0_0)]} 15.0x}
CGA {[] [{CTC:[2]}] [{CGC:[1,2,33,35]}] [] {5':[], ~5':[(35-0_0),(33-0_0)]} 4.0x}
CTA {[] [{CTA:[2,3,4]}, {ATA:[25,26]}] [{AGC:[2,3]}, {AGG:[3,4]}] [{ACT:[1,24,25,26]}] {5':[(2-0_0),(4-0_0)], ~5':[(1-0_0)]} 12.0x}
CAC {[{ACG:[23,37]}, {ACA:[37]}] [] [] [{ACT:[1]}, {TCA:[22,23]}, {GCA:[1,2]}, {ACG:[21,22,36]}, {CCA:[37]}, {ACA:[36,37]}] {5':[], ~5':[]} 8.0x}
CCC {[] [{AGG:[3,4]}] [] [{ACC:[3,4,5]}] {5':[], ~5':[]} 3.0x}
CGC {[{GCA:[2,6]}] [{AGC:[1,2,3,6,32,33,35,36]}] [{CGA:[1,2,33,35]}, {CGC:[1,2,6]}] [{GCA:[1]}, {ACG:[31,32,36,37]}] {5':[(3-0_0)], ~5':[(31-0_0)]} 15.0x}
CTC {[] [{GGA:[4,5]}, {CGA:[2]}, {AGA:[12,13,14]}] [{AGG:[2,4]}, {AGA:[13,14]}] [{ACT:[4,5]}] {5':[(12-0_0)], ~5':[(4-0_0)]} 7.0x}
CAG {[{AGC:[7]}, {AGA:[9,10,11]}] [] [] [{AGC:[6]}, {AGA:[12,13]}, {TCA:[6,7,8]}, {GCA:[10,11]}, {CCA:[11,12,13]}] {5':[(9-0_0)], ~5':[(8-0_0),(11-0_0)]} 9.0x}
CCG {[] [{ACG:[16,17]}] [] [{GCC:[15,16,17]}] {5':[], ~5':[(15-0_0)]} 3.0x}
AAA {[{AAT:[8]}, {AAC:[17,24,25]}] [] [] [{AAT:[9]}, {AAC:[18,23]}, {GAA:[7,8,9,17,18,19,23,24]}] {5':[(25-0_0)], ~5':[(7-0_0)]} 9.0x}
GAA {[{AAA:[8,17,19,24]}] [] [{TCA:[7,8,18,19,22,23,24]}] [{AAA:[7,9,18,23]}] {5':[(17-0_0)], ~5':[]} 9.0x}
ACA {[{CAC:[37]}] [] [] [{CAC:[36,37]}] {5':[], ~5':[]} 2.0x}
GCA {[{CAC:[2]}, {CAA:[5]}, {CAG:[10,11]}] [{ATG:[1,6,14,15,16]}] [{GCC:[10,11,12,15,16]}] [{AGC:[5,6,7]}, {CAC:[1]}, {CGC:[1,2,6]}, {CAA:[6]}] {5':[(14-0_0)], ~5':[]} 14.0x}
AGA {[] [{ATC:[9,10,13,14,15]}, {CTC:[12,13,14]}] [{CTC:[13,14]}] [{CAG:[9,10,11,12,13]}] {5':[], ~5':[]} 9.0x}
GGA {[] [{CTC:[4,5]}] [] [{AGG:[3,4,5]}] {5':[], ~5':[]} 3.0x}
ATA {[] [{CTA:[25,26]}, {GTA:[20,21]}] [] [{AAT:[19,20,21,25,26,27]}] {5':[], ~5':[(19-0_0),(27-0_0)]} 6.0x}
GTA {[{TAA:[26]}] [{ATA:[20,21]}] [{ACG:[20,21,22,27,28]}] [{TAA:[27,28]}] {5':[(26-0_0)], ~5':[(22-0_0)]} 6.0x}
AAC {[{ACT:[24,25]}, {ACG:[16,17]}, {ACC:[5]}] [] [] [{ACT:[5]}, {ACG:[18]}, {ACC:[4]}, {CAA:[4,5,6]}, {AAA:[17,18,23,24,25]}] {5':[(16-0_0)], ~5':[(23-0_0),(6-0_0)]} 10.0x}
GAC {[{ACG:[29]}] [] [{TCA:[28,29,30,31,32]}] [{ACG:[28,31,32]}] {5':[], ~5':[(30-0_0)]} 6.0x}
ACC {[{CCC:[5]}] [] [] [{AAC:[4,5]}, {CCC:[3,4]}] {5':[], ~5':[]} 3.0x}
GCC {[] [] [{GCA:[10,11,12,15,16]}] [{CCG:[15,16,17]}, {CCA:[11,12]}] {5':[], ~5':[(10-0_0)]} 6.0x}
AGC {[{GCA:[5,7]}] [{CGC:[1,2,3,6,32,33,35,36]}] [{CTA:[2,3]}] [{GCA:[6]}, {AAG:[32,33,34,35,36]}, {CAG:[6,7]}] {5':[(6-0_0),(5-0_0)], ~5':[(34-0_0),(3-0_0)]} 14.0x}
ATC {[] [{AGA:[9,10,13,14,15]}] [{ATG:[14,15]}] [{AAT:[8,9,10]}] {5':[(13-0_0)], ~5':[]} 6.0x}
AAG {[{AGC:[32,34,36]}] [] [] [{TAA:[33,34,35]}, {AGC:[33,34,35]}] {5':[(32-0_0),(36-0_0)], ~5':[]} 6.0x}
ACG {[{CGC:[37]}] [{CCG:[16,17]}, {ACG:[21,22,27,28,29]}] [{GTA:[20,21,22,27,28]}] [{GAC:[28,29,31,32]}, {CAC:[21,22,23,36,37]}, {CGC:[31,32,36]}, {AAC:[16,17,18]}] {5':[], ~5':[(18-0_0)]} 19.0x}
AGG {[{GGA:[3,4,5]}] [{CCC:[3,4]}] [{CTA:[3,4]}, {CTC:[2,4]}] [] {5':[(5-0_0)], ~5':[(2-0_0)]} 6.0x}
ATG {[] [{TCA:[29,30,31]}, {GCA:[1,6,14,15,16]}] [{ATC:[14,15]}, {ATG:[29,30,31]}] [{AAT:[1,6]}] {5':[], ~5':[(29-0_0)]} 11.0x}
AAT {[{ATG:[1]}, {ATC:[8]}, {ATA:[20,21,26]}] [] [] [{TAA:[26,27]}, {ATG:[6]}, {ATC:[9,10]}, {CAA:[19,20]}, {AAA:[8,9]}, {ATA:[19,25,27]}] {5':[(21-0_0),(1-0_0)], ~5':[]} 11.0x}
ACT {[{CTA:[24,25]}] [] [] [{CAC:[1]}, {AAC:[5,24,25]}, {CTA:[1,26]}, {CTC:[4,5]}] {5':[], ~5':[]} 6.0x}