Merge fullstack_asterix_stabilization with fullstack_hyracks_result_distribution.

git-svn-id: https://hyracks.googlecode.com/svn/branches/fullstack_hyracks_result_distribution@3170 123451ca-8445-de46-9d55-352943316053
diff --git a/pregelix-core/pom.xml b/pregelix-core/pom.xml
index 5238068..e14ac41 100644
--- a/pregelix-core/pom.xml
+++ b/pregelix-core/pom.xml
@@ -19,8 +19,9 @@
 	<build>
 		<plugins>
 			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
 				<artifactId>maven-jar-plugin</artifactId>
-				<version>2.4</version>
+				<version>2.3.2</version>
 				<executions>
 					<execution>
 						<id>balancer</id>
@@ -65,15 +66,15 @@
 				<artifactId>maven-compiler-plugin</artifactId>
 				<version>2.0.2</version>
 				<configuration>
-					<source>1.7</source>
-					<target>1.7</target>
+					<source>1.6</source>
+					<target>1.6</target>
 					<fork>true</fork>
 				</configuration>
 			</plugin>
 			<plugin>
 				<groupId>org.codehaus.mojo</groupId>
 				<artifactId>appassembler-maven-plugin</artifactId>
-				<version>1.3</version>
+                <version>1.3</version>
 				<executions>
 					<execution>
 						<configuration>
@@ -165,7 +166,7 @@
 			</plugin>
 			<plugin>
 				<artifactId>maven-clean-plugin</artifactId>
-				<version>2.5</version>
+                <version>2.4.1</version>
 				<configuration>
 					<filesets>
 						<fileset>
diff --git a/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/driver/Driver.java b/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/driver/Driver.java
index f07a246..d9b267d 100644
--- a/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/driver/Driver.java
+++ b/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/driver/Driver.java
@@ -141,22 +141,11 @@
             start = System.currentTimeMillis();
             runHDFSWRite(jobGen);
             runCleanup(jobGen);
-            destroyApplication(applicationName);
             end = System.currentTimeMillis();
             time = end - start;
             LOG.info("result writing finished " + time + "ms");
             LOG.info("job finished");
         } catch (Exception e) {
-            try {
-                /**
-                 * destroy application if there is any exception
-                 */
-                if (hcc != null) {
-                    destroyApplication(applicationName);
-                }
-            } catch (Exception e2) {
-                throw new HyracksException(e2);
-            }
             throw new HyracksException(e);
         }
     }
@@ -214,8 +203,8 @@
 
     private void execute(JobSpecification job) throws Exception {
         job.setUseConnectorPolicyForScheduling(false);
-        JobId jobId = hcc.startJob(applicationName, job,
-                profiling ? EnumSet.of(JobFlag.PROFILE_RUNTIME) : EnumSet.noneOf(JobFlag.class));
+        JobId jobId = hcc
+                .startJob(job, profiling ? EnumSet.of(JobFlag.PROFILE_RUNTIME) : EnumSet.noneOf(JobFlag.class));
         hcc.waitForCompletion(jobId);
     }
 
@@ -230,15 +219,11 @@
         LOG.info("jar packing finished " + (end - start) + "ms");
 
         start = System.currentTimeMillis();
-        hcc.createApplication(applicationName, appZip);
+        // TODO: Fix this step to use Yarn
+        //hcc.createApplication(applicationName, appZip);
         end = System.currentTimeMillis();
         LOG.info("jar deployment finished " + (end - start) + "ms");
     }
-
-    public void destroyApplication(String appName) throws Exception {
-        hcc.destroyApplication(appName);
-    }
-
 }
 
 class FileFilter implements FilenameFilter {
diff --git a/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/util/PregelixHyracksIntegrationUtil.java b/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/util/PregelixHyracksIntegrationUtil.java
index c343763..d099645 100644
--- a/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/util/PregelixHyracksIntegrationUtil.java
+++ b/pregelix-core/src/main/java/edu/uci/ics/pregelix/core/util/PregelixHyracksIntegrationUtil.java
@@ -26,6 +26,7 @@
 import edu.uci.ics.hyracks.control.common.controllers.NCConfig;
 import edu.uci.ics.hyracks.control.nc.NodeControllerService;
 import edu.uci.ics.pregelix.core.jobgen.clusterconfig.ClusterConfig;
+import edu.uci.ics.pregelix.runtime.bootstrap.NCApplicationEntryPoint;
 
 public class PregelixHyracksIntegrationUtil {
 
@@ -66,6 +67,7 @@
         ncConfig1.dataIPAddress = "127.0.0.1";
         ncConfig1.datasetIPAddress = "127.0.0.1";
         ncConfig1.nodeId = NC1_ID;
+        ncConfig1.appNCMainClass = NCApplicationEntryPoint.class.getName();
         nc1 = new NodeControllerService(ncConfig1);
         nc1.start();
 
@@ -76,6 +78,7 @@
         ncConfig2.dataIPAddress = "127.0.0.1";
         ncConfig2.datasetIPAddress = "127.0.0.1";
         ncConfig2.nodeId = NC2_ID;
+        ncConfig2.appNCMainClass = NCApplicationEntryPoint.class.getName();
         nc2 = new NodeControllerService(ncConfig2);
         nc2.start();
 
@@ -84,14 +87,6 @@
         ClusterConfig.loadClusterConfig(CC_HOST, TEST_HYRACKS_CC_CLIENT_PORT);
     }
 
-    public static void destroyApp(String hyracksAppName) throws Exception {
-        hcc.destroyApplication(hyracksAppName);
-    }
-
-    public static void createApp(String hyracksAppName) throws Exception {
-        hcc.createApplication(hyracksAppName, null);
-    }
-
     public static void deinit() throws Exception {
         nc2.stop();
         nc1.stop();
@@ -100,7 +95,7 @@
 
     public static void runJob(JobSpecification spec, String appName) throws Exception {
         spec.setFrameSize(FRAME_SIZE);
-        JobId jobId = hcc.startJob(appName, spec, EnumSet.of(JobFlag.PROFILE_RUNTIME));
+        JobId jobId = hcc.startJob(spec, EnumSet.of(JobFlag.PROFILE_RUNTIME));
         hcc.waitForCompletion(jobId);
     }
 
diff --git a/pregelix-core/src/main/resources/scripts/startnc.sh b/pregelix-core/src/main/resources/scripts/startnc.sh
index 6e0f90e..b059aad 100644
--- a/pregelix-core/src/main/resources/scripts/startnc.sh
+++ b/pregelix-core/src/main/resources/scripts/startnc.sh
@@ -46,4 +46,4 @@
 cd $NCTMP_DIR
 
 #Launch hyracks nc
-$HYRACKS_HOME/hyracks-server/target/appassembler/bin/hyracksnc -cc-host $CCHOST -cc-port $CC_CLUSTERPORT -cluster-net-ip-address $IPADDR  -data-ip-address $IPADDR -node-id $NODEID -iodevices "${IO_DIRS}" &> $NCLOGS_DIR/$NODEID.log &
+$HYRACKS_HOME/hyracks-server/target/appassembler/bin/hyracksnc -cc-host $CCHOST -cc-port $CC_CLUSTERPORT -cluster-net-ip-address $IPADDR  -data-ip-address $IPADDR -result-ip-address $IPADDR  -node-id $NODEID -iodevices "${IO_DIRS}" &> $NCLOGS_DIR/$NODEID.log &
diff --git a/pregelix-core/src/main/resources/scripts/stopnc.sh b/pregelix-core/src/main/resources/scripts/stopnc.sh
index 03ce4e7..35c4794 100644
--- a/pregelix-core/src/main/resources/scripts/stopnc.sh
+++ b/pregelix-core/src/main/resources/scripts/stopnc.sh
@@ -5,6 +5,10 @@
 PID=`ps -ef|grep ${USER}|grep java|grep 'Dapp.name=hyracksnc'|awk '{print $2}'`
 
 if [ "$PID" == "" ]; then
+  PID=`ps -ef|grep ${USER}|grep java|grep 'hyracks'|awk '{print $2}'`
+fi
+
+if [ "$PID" == "" ]; then
   USERID=`id | sed 's/^uid=//;s/(.*$//'`
   PID=`ps -ef|grep ${USERID}|grep java|grep 'Dapp.name=hyracksnc'|awk '{print $2}'`
 fi
diff --git a/pregelix-core/src/test/java/edu/uci/ics/pregelix/core/join/JoinTest.java b/pregelix-core/src/test/java/edu/uci/ics/pregelix/core/join/JoinTest.java
index 97659d4..572bff9 100644
--- a/pregelix-core/src/test/java/edu/uci/ics/pregelix/core/join/JoinTest.java
+++ b/pregelix-core/src/test/java/edu/uci/ics/pregelix/core/join/JoinTest.java
@@ -103,7 +103,6 @@
         ClusterConfig.setClusterPropertiesPath(PATH_TO_CLUSTER_PROPERTIES);
         cleanupStores();
         PregelixHyracksIntegrationUtil.init();
-        PregelixHyracksIntegrationUtil.createApp(HYRACKS_APP_NAME);
 
         FileUtils.forceMkdir(new File(EXPECT_RESULT_DIR));
         FileUtils.forceMkdir(new File(ACTUAL_RESULT_DIR));
@@ -121,7 +120,6 @@
         runIndexRightOuterJoin();
         TestUtils.compareWithResult(new File(EXPECTED_RESULT_FILE), new File(ACTUAL_RESULT_FILE));
 
-        PregelixHyracksIntegrationUtil.destroyApp(HYRACKS_APP_NAME);
         PregelixHyracksIntegrationUtil.deinit();
     }