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asterix-gerrit.ics.uci.edu / hyracks / f8f20fa2e781be7b79bcab73712f22adda222b76 / genomix
  1. f8f20fa add getclassloader() log for hyracks' driver by Nan Zhang · 12 years ago
  2. 11cfa9f change the stat package name in graph building of hyracks by Nan Zhang · 12 years ago
  3. 772cebd add graphviz mac version for graph building of hyracks by Nan Zhang · 12 years ago
  4. 3b25dd4 add frame size pressure test package in driver by Nan Zhang · 12 years ago
  5. eecb337 increase wait time and add a shutdown hook that stops the clusters by Jake Biesinger · 12 years ago
  6. 2d72d3e add -followsGraphBuild for those inputs proceeding build by Jake Biesinger · 12 years ago
  7. 8f6b461 refactor pregelix job creation by Anbang Xu · 12 years ago
  8. 33d8284 fix driverUtils string value by Anbang Xu · 12 years ago
  9. a32d7ce adjust job history size by Nan Zhang · 12 years ago
  10. 56af037 remove framesize from command-line parameters by Jake Biesinger · 12 years ago
  11. 6c4e526 read and set framesize from cluster.properties by Jake Biesinger · 12 years ago
  12. b6ca725 add the option of frame size by Nan Zhang · 12 years ago
  13. 5cda522 format test case by Anbang Xu · 12 years ago
  14. 2246913 Small change by Anbang Xu · 12 years ago
  15. a90fdd9 update pregelix vertexes to initialize static values by Jake Biesinger · 12 years ago
  16. 15b6f47 add MAX_READ_IDS_PER_EDGE in opts parser and jobs by Jake Biesinger · 12 years ago
  17. d169c54 auto-discover CC port and IP settings (broke runLocal) by Jake Biesinger · 12 years ago
  18. 843db89 Don't use infiniband ports (look into in the future) by Jake Biesinger · 12 years ago
  19. 21bb3d6 don't reuse Hyracks CC in Pregelix jobs by Jake Biesinger · 12 years ago
  20. 4aa155f increase wait time and defer creating the driver until NCs are active by Jake Biesinger · 12 years ago
  21. 284e5f1 use .pid files to track the CC and NC nodes by Jake Biesinger · 12 years ago
  22. 3bb11f5 move start/stop cluster in utils by Jake Biesinger · 12 years ago
  23. f18eed5 Add some logging and attempt to shut down servers on exception by Jake Biesinger · 12 years ago
  24. 5936fcb fix NPE by Jake Biesinger · 12 years ago
  25. ddeb021 Split driver utilities into their own file by Jake Biesinger · 12 years ago
  26. e643029 genomix driver is responsible for start/stop of Hyracks/Pregelix clusters by Jake Biesinger · 12 years ago
  27. dc32cf2 separate NC's for pregelix and hyracks by Jake Biesinger · 12 years ago
  28. 11823d7 simpler commands for script GENOMIX_HOME resolution by Jake Biesinger · 12 years ago
  29. d4b581c Run cluster and driver scripts from anywhere by Jake Biesinger · 12 years ago
  30. 4aaa309 Merge branch 'genomix/experiment_master_genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  31. b89c7c5 Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by Anbang Xu · 12 years ago
  32. a1b1e45 add simple command to each pattern by Anbang Xu · 12 years ago
  33. 86edb32 change command for scaffolding by Anbang Xu · 12 years ago
  34. 423fd16 Fix all synchronization issues by Anbang Xu · 12 years ago
  35. 81833a0 add scaffoldingAggregator by Anbang Xu · 12 years ago
  36. ee7dac3 Add synchronization to static variable by Anbang Xu · 12 years ago
  37. 6a6ff67 modify the option of NlinesPerMap to false by Nan Zhang · 12 years ago
  38. cf91139 remove incorrect expected file by Nan Zhang · 12 years ago
  39. 73793d5 small change for rebase by Nan Zhang · 12 years ago
  40. 558ea60 Merge aggregator with main branch by Anbang Xu · 12 years ago
  41. 50b28b6 Adpat hadoop testsuite to have linespermap arg by Anbang Xu · 12 years ago
  42. 806ff79 add linesPerMap parameter to hadoop graph building driver by Anbang Xu · 12 years ago
  43. 4da15b2 add many similar bubbles in one pattern test case and BubbleMerge pass test by Anbang Xu · 12 years ago
  44. a9c60b3 The aggregator for all the patterns are completed by Anbang Xu · 12 years ago
  45. 1aed014 add statistics counters to removeTip, pathMerge, removeBridge by Anbang Xu · 12 years ago
  46. 4e63417 fix location of stores.properties by Jake Biesinger · 12 years ago
  47. dd63616 add stores.properties (deleted by?) by Jake Biesinger · 12 years ago
  48. 476760d Add timed logging to genomix-driver jobs by Jake Biesinger · 12 years ago
  49. 7f2208f PathMerge aggregator is completed by Anbang Xu · 12 years ago
  50. 52a279f Aggregator passes test by Anbang Xu · 12 years ago
  51. b1c7809 testing by Anbang Xu · 12 years ago
  52. f3a548c move aggregator output to test by Anbang Xu · 12 years ago
  53. daa7780 fix NLineInputFormat for real by Jake Biesinger · 12 years ago
  54. 6ec5f66 don't use NLineInputFormat for now by Jake Biesinger · 12 years ago
  55. ca28b1b add StatisticsCounterAggregator by Anbang Xu · 12 years ago
  56. 270d47a add NlineInputFormat by Nan Zhang · 12 years ago
  57. 0d0f899 use command-line args in genomix-driver by Jake Biesinger · 12 years ago
  58. 014dafc add graph building checking job by Nan Zhang · 12 years ago
  59. 7ac727c Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by Anbang Xu · 12 years ago
  60. 676a268 stats are binned by whole value by Jake Biesinger · 12 years ago
  61. affc0b4 toString's on edgeList and positionList are sorted by Jake Biesinger · 12 years ago
  62. 65ee367 add STATS and DUMP_FASTA steps to the graph (run locally) by Jake Biesinger · 12 years ago
  63. 9fdf74d larger chunks for hadoop graphbuilding by Jake Biesinger · 12 years ago
  64. 5be5c46 fix coresPerMachine's default values by Jake Biesinger · 12 years ago
  65. 8c187a6 add RandonWalk test case by Anbang Xu · 12 years ago
  66. 88e9442 RemoveTip pass test by Anbang Xu · 12 years ago
  67. e71a964 Unroll Repeat pass test by Anbang Xu · 12 years ago
  68. 28cbeae save intermediate results by default (found a bug in pregelix-core?) by Jake Biesinger · 12 years ago
  69. 8b79c57 don't save intermediate results by default; add option to do so by Jake Biesinger · 12 years ago
  70. 67688c3 remove the genomix-pregelix testcase config files (again) by Jake Biesinger · 12 years ago
  71. f9e6e5f add hadoop building to the driver by Jake Biesinger · 12 years ago
  72. 17b99f2 add stop haltNode in pathmerge and fix the bug Jake mentioned by Anbang Xu · 12 years ago
  73. 39cfc58 add synthetic test case by Jake Biesinger · 12 years ago
  74. 9dec13e remove generated genomix-pregel test case xml files by Jake Biesinger · 12 years ago
  75. c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  76. 1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
  77. b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
  78. fc4fe25 add failing pathmerge testcase by Jake Biesinger · 12 years ago
  79. 32a956b fix one bug in path merge by Anbang Xu · 12 years ago
  80. 630586c add test case for synthetic data by Jake Biesinger · 12 years ago
  81. d75565c add option for corespermachine in jobconf by Nan Zhang · 12 years ago
  82. d980562 small clean for genomix-hyracks code by Nan Zhang · 12 years ago
  83. 21c3906 genomix-driver copies results to text by Jake Biesinger · 12 years ago
  84. 5747845 Pregelix JobGenerator uses proper GenomixJobConf by Jake Biesinger · 12 years ago
  85. 96eab83 Merge branch 'anbangx/backupMergingWithMaster' into wbiesing/driver_backup_merge by Jake Biesinger · 12 years ago
  86. 26e7332 BubbleMerge test is almost finished except grid test case by Anbang Xu · 12 years ago
  87. 0d6afba remove minidfs cluster (so writing directly to lcoal disk now) by Jake Biesinger · 12 years ago
  88. 34c19fd refactoring local mode by Jake Biesinger · 12 years ago
  89. ab0b235 test Rectangle by Anbang Xu · 12 years ago
  90. febbaf1 add EdgeListWritable.addUnion(edge) by Jake Biesinger · 12 years ago
  91. 85dfedf Add broadcaseKillselfAndNoticeToUpdateEdges and responseToDeadVertexAndUpdateEdges by Anbang Xu · 12 years ago
  92. 2075152 add .tar.gz as an assembly target by Jake Biesinger · 12 years ago
  93. a332dbe copy conf directory into binary assembly output by Jake Biesinger · 12 years ago
  94. 4e22bc4 genomix driver takes a directory as local input by Jake Biesinger · 12 years ago
  95. 002533a genomix driver -ip and -runLocal are mutually exclusive by Jake Biesinger · 12 years ago
  96. 3e1eb90 change bubble merge "add" to use boolean `flip` by Jake Biesinger · 12 years ago
  97. c0b37b1 change bubble's pre-condition -- pathNode to anyNode by Anbang Xu · 12 years ago
  98. 97d97cd add bubble's addReadIDs by Jake Biesinger · 12 years ago
  99. e763a06 add complicated test case for BubbleMerge by Anbang Xu · 12 years ago
  100. 51a0502 separate genomix driver in/out to local/hdfs by Jake Biesinger · 12 years ago