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asterix-gerrit.ics.uci.edu / hyracks / f367fd5343e6311e8db6f15f57a428bc74bbfc5d / genomix
  1. f367fd5 add data clean by AnbangX · 12 years ago
  2. 9ac3f6c reformat by Jake Biesinger · 12 years ago
  3. 03364d3 restore strangely deleted MergePaths code by Jake Biesinger · 12 years ago
  4. d91b4fb Fix H3 test case by Jake Biesinger · 12 years ago
  5. 5215ff5 Updated base class for tests allows mutliple Test cases by Jake Biesinger · 12 years ago
  6. 79da38a clean code by Nan Zhang · 12 years ago
  7. 5d3d527 delete he pcommon by Nan Zhang · 12 years ago
  8. 37cc20b hadoop graph building completion by Nan Zhang · 12 years ago
  9. e66c773 build graph by Nan Zhang · 12 years ago
  10. eb8d72a Merge commit '951870ef4642f2003c4240eeef702fc90600fe77' into nanzhang/genomix by Nan Zhang · 12 years ago
  11. 3a26a3a merge with jianfeng-reverse by Nan Zhang · 12 years ago
  12. 631482f add first small test case by AnbangX · 12 years ago
  13. 30f28d0 new code for bi-direction graph build by AnbangX · 12 years ago
  14. 3931ef7 Broke test cases into base class plus small tests by Jake Biesinger · 12 years ago
  15. bf9401e increase default frameSize to 128K by Jianfeng Jia · 12 years ago
  16. 8040709 add log to watch the tuple size by Jianfeng Jia · 12 years ago
  17. 12b4280 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  18. 5ba19e2 add more information for larger data debug by Jianfeng Jia · 12 years ago genomix/unidirection
  19. 8a50889 fix outputKmerFactory racing problem by Jianfeng Jia · 12 years ago
  20. 33dc862 fix debugNc script by JavierJia · 12 years ago
  21. dba2ebf Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  22. 22616cf fixed the racing problem by Jianfeng Jia · 12 years ago
  23. e7b1730 Merge branch 'genomix/fullstack_bidirection' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  24. edb2170 Merge branch 'wbiesing/genomix/h3' into jianfeng/genomix-reverse by Jake Biesinger · 12 years ago
  25. f8261bc Add a unit test for H3 which builds the graph by Jake Biesinger · 12 years ago
  26. d23e0a7 Merge commit 'aa985fe572d4a78aa904a6d8524df96ef29db7ea' into nanzhang/genomix by Nan Zhang · 12 years ago
  27. 9bc1c38 modify building by Nan Zhang · 12 years ago
  28. 763ee99 fix builder.reset bug by JavierJia · 12 years ago
  29. aa985fe Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  30. 1f37dce fix builder.reset bug by JavierJia · 12 years ago
  31. 1d7de64 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  32. 923b215 Merge branch 'jianfeng/genomix' into genomix/fullstack_genomix by Jianfeng Jia · 12 years ago
  33. 1be1d3e fix binary format test by JavierJia · 12 years ago
  34. 6e8b44b change pom main class by Jianfeng Jia · 12 years ago
  35. bb2dd3f change main class by Jianfeng Jia · 12 years ago
  36. 48ef17c Merge branch 'jianfeng/genomix-reverse' into genomix/fullstack_genomix by Jianfeng Jia · 12 years ago
  37. f6640db Passed test by Jianfeng Jia · 12 years ago
  38. 562116a finished framework. not test yet by Jianfeng Jia · 12 years ago
  39. 8528899 finish framework by Jianfeng Jia · 12 years ago
  40. c2a055b new graph building progress by Nan Zhang · 12 years ago
  41. 006f744 Merge commit '983a7076e4b24cd421d16a3cd6987bc94275a2bc' into nanzhang/genomix by Nan Zhang · 12 years ago
  42. 1181e3c modify the driver of velvet_graphbuilding by Nan Zhang · 12 years ago
  43. 5033f6f Update comment. by Jianfeng Jia · 12 years ago
  44. 587ddb7 finished merge pre and merge next test by Jianfeng Jia · 12 years ago
  45. 7f506a1 modify the DeepGraphBuildingMapper by Nan Zhang · 12 years ago
  46. e215121 Merge branch 'nanzhang/genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  47. b8ae860 modify the velvet-graph building package by Nan Zhang · 12 years ago
  48. 8663daa Merge branch 'nanzhang/genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  49. d01123b Use different initial and subsequent mappers in H3 by Jake Biesinger · 12 years ago
  50. 01454bd H3 implemented, untested by Jake Biesinger · 12 years ago
  51. 0669e98 add isPathNode to NodeWritable by Jake Biesinger · 12 years ago
  52. d891139 WIP: H3 implementation, using multiple tails by Jake Biesinger · 12 years ago
  53. 7c14c8f Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into jianfeng/genomix by Jianfeng Jia · 12 years ago
  54. 369fccb update the velvetGrapubuilding package by Nan Zhang · 12 years ago
  55. f14c403 add mergeNext function to kmerWritable by Jianfeng Jia · 12 years ago
  56. 7636684 refine the logic of generate Node by Jianfeng Jia · 12 years ago
  57. 103df19 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by AnbangX · 12 years ago
  58. f5d6db9 change all input and output format to new version by AnbangX · 12 years ago
  59. 2c48b66 Merge branch 'nanzhang/genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  60. c49ce70 add package to build old package success by Nan Zhang · 12 years ago
  61. a6e78ab do some changes to test git rebase by AnbangX · 12 years ago
  62. 529a089 finished EndToEnd test by Jianfeng Jia · 12 years ago
  63. 9804780 passed readid groupby test by Jianfeng Jia · 12 years ago
  64. 80b312a passed map kmer to readid operator by Jianfeng Jia · 12 years ago
  65. c2bb663 passed kmer groupby test by Jianfeng Jia · 12 years ago
  66. c5172dd reformat JobGen to avoid NonSerializable exception by Jianfeng Jia · 12 years ago
  67. ee2e038 finished test framework by JavierJia · 12 years ago
  68. 935f676 Merge branch 'genomix/velvet_graphbuilding' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  69. b19726a change code format in p3 by AnbangX · 12 years ago genomix/pre-velvet-graph
  70. 6b03061 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  71. 52a9b96 delete all experiments on fullstack_genomix by Nan Zhang · 12 years ago
  72. a688f7d change name of one package by Nan Zhang · 12 years ago
  73. c61eeb4 Merge branch 'genomix/fullstack_genomix' into genomix/velvet_graphbuilding by Nan Zhang · 12 years ago
  74. cfb8871 delete the genomic.data.experiments by Nan Zhang · 12 years ago
  75. 6b5f7a2 update the test to genomix-hyracks by JavierJia · 12 years ago
  76. 1d11e0a finish position test by JavierJia · 12 years ago
  77. 5d192ad finished genomix-hyracks end to end by JavierJia · 12 years ago
  78. 5af9dff finish debug in p3 by AnbangX · 12 years ago
  79. e85c8a7 merge with hadoop code by JavierJia · 12 years ago
  80. ee1fa17 Merge branch 'genomix/velvet_graphbuilding' of https://code.google.com/p/hyracks into genomix/velvet_graphbuilding by JavierJia · 12 years ago
  81. fe1391a passed genomix-data test by JavierJia · 12 years ago
  82. e34200e create some writable based on Jianfeng's hyracks by Nan Zhang · 12 years ago
  83. ba0d0d8 clean up kmerWritable by JavierJia · 12 years ago
  84. d0f8cbf Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by AnbangX · 12 years ago
  85. e04250d add p3 by AnbangX · 12 years ago
  86. d158252 finish design of NodeReferenc API by JavierJia · 12 years ago
  87. 46cca29 update result3 by Nan Zhang · 12 years ago
  88. 006ff46 new package for path merge by Nan Zhang · 12 years ago
  89. b1ee50c merge path update by Nan Zhang · 12 years ago
  90. b52a13d new update for new version graph-building by Nan Zhang · 12 years ago
  91. db498da Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by AnbangX · 12 years ago
  92. e406bf5 add hyrack format by AnbangX · 12 years ago
  93. 0047d3c after code view h1 h2 update by Nan Zhang · 12 years ago
  94. bef5ad0 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  95. 9bb94d2 new GenomixMapper by Nan Zhang · 12 years ago
  96. c2aac14 new version of genomix graph building frameworks by Nan Zhang · 12 years ago
  97. 3991572 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  98. 18a954f add new version graph building frameworks by Nan Zhang · 12 years ago
  99. c9d802a Remove mac .DS_Store files and ignore them in the future. by Jake Biesinger · 12 years ago
  100. 4c33a7a finished framework by JavierJia · 12 years ago