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hyracks
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d7fb5ef0042f91a90144980a7f7308049d1213e7
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genomix
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genomix-pregelix
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data
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TestSet
cc1135b
change addEdge to unionEdge in update
by Anbang Xu
· 12 years ago
4b21369
Fix TandemRepeatAndCycle bug
by Anbang Xu
· 12 years ago
3e91447
add test case for tandem repeats with multiple self-edges
by Jake Biesinger
· 12 years ago
5ecb66f
seperate MessageFlag and State
by Anbang Xu
· 12 years ago
6485489
Final Vertex Has correct edgelist
by Anbang Xu
· 12 years ago
4da15b2
add many similar bubbles in one pattern test case and BubbleMerge pass test
by Anbang Xu
· 12 years ago
1aed014
add statistics counters to removeTip, pathMerge, removeBridge
by Anbang Xu
· 12 years ago
8c187a6
add RandonWalk test case
by Anbang Xu
· 12 years ago
88e9442
RemoveTip pass test
by Anbang Xu
· 12 years ago
e71a964
Unroll Repeat pass test
by Anbang Xu
· 12 years ago
39cfc58
add synthetic test case
by Jake Biesinger
· 12 years ago
c2aa582
Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix
by Jake Biesinger
· 12 years ago
1e03787
Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup
by Jake Biesinger
· 12 years ago
b19ba95
BubbleMerge pass complicated test cases
by Anbang Xu
· 12 years ago
fc4fe25
add failing pathmerge testcase
by Jake Biesinger
· 12 years ago
32a956b
fix one bug in path merge
by Anbang Xu
· 12 years ago
630586c
add test case for synthetic data
by Jake Biesinger
· 12 years ago
96eab83
Merge branch 'anbangx/backupMergingWithMaster' into wbiesing/driver_backup_merge
by Jake Biesinger
· 12 years ago
26e7332
BubbleMerge test is almost finished except grid test case
by Anbang Xu
· 12 years ago
c0b37b1
change bubble's pre-condition -- pathNode to anyNode
by Anbang Xu
· 12 years ago
e763a06
add complicated test case for BubbleMerge
by Anbang Xu
· 12 years ago
6ddc6cc
testing BubbleMerge
by Anbang Xu
· 12 years ago
3aba0f0
SplitRepeat test is completed
by Anbang Xu
· 12 years ago
41ffd05
Merge with main branch
by Anbang Xu
· 12 years ago
4a9e45c
Add testcases for SplitRepeat
by Anbang Xu
· 12 years ago
d688b5a
Add skip tandem repeat to pathmerge. TODO: detect cycle in pathmerge
by Anbang Xu
· 12 years ago
87b679f
Merge branch 'anbangx/fullstack_genomix' into wbiesing/driver
by Jake Biesinger
· 12 years ago
2f3e3bb
PathMerge pass test except TandemRepeat. TODO: skip TandemRepeat in pathmerge
by Anbang Xu
· 12 years ago
03434ff
add hyracks-built graph as a pregelix test case
by Jake Biesinger
· 12 years ago
569945a
add RF/FR with/without head test for pathmerge
by Anbang Xu
· 12 years ago
9ac0dda
Modify mergeWithKmer to mergeWithNode
by Anbang Xu
· 12 years ago
d06c50f
add testcase for pathmerge
by Anbang Xu
· 12 years ago
ca15771
UnrollTandemRepeat is completed
by Anbang Xu
· 12 years ago
b37b705
Add UnRollTandemRepeat. TODO: add the corresponding MSG and update edges
by Anbang Xu
· 12 years ago
5e01f76
Adapt RemoveLowCoverageVertex to new graph structure. Finally, all the patterns are adapted to new graph
by Anbang Xu
· 12 years ago
e7856d5
Adapt ScaffoldingVertex to new graph structure
by Anbang Xu
· 12 years ago
6212780
BTS almost done and wait for EdgeListWritable[dir].getReadIds(Key key)
by Anbang Xu
· 12 years ago
0217e7e
Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat
by Anbang Xu
· 12 years ago
37a8489
Adapt MergeBubbleVertex to new graph structure. TODO: check if bubble flip and merge all metadata except kmer
by Anbang Xu
· 12 years ago
977a413
Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure
by Anbang Xu
· 12 years ago
4370b2b
adapt TipAddVertex and TipRemoveVertex to new graph structure
by Anbang Xu
· 12 years ago
112cdf7
Adapt MapReduceVertex and P4 to new graph structure
by Anbang Xu
· 12 years ago
e7885ee
Pregel TestSuite is completed
by Anbang Xu
· 12 years ago