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asterix-gerrit.ics.uci.edu / hyracks / c61eeb45e00cb2ce8d264c575b300d7178405d2a / genomix / genomix-data / src / main / java
  1. 1d11e0a finish position test by JavierJia · 12 years ago
  2. 5d192ad finished genomix-hyracks end to end by JavierJia · 12 years ago
  3. e85c8a7 merge with hadoop code by JavierJia · 12 years ago
  4. ee1fa17 Merge branch 'genomix/velvet_graphbuilding' of https://code.google.com/p/hyracks into genomix/velvet_graphbuilding by JavierJia · 12 years ago
  5. fe1391a passed genomix-data test by JavierJia · 12 years ago
  6. e34200e create some writable based on Jianfeng's hyracks by Nan Zhang · 12 years ago
  7. ba0d0d8 clean up kmerWritable by JavierJia · 12 years ago
  8. 4c33a7a finished framework by JavierJia · 12 years ago
  9. 136c411 finish mapKmerToReadID by JavierJia · 12 years ago
  10. 4803aea compatible with invalid read by Jianfeng Jia · 12 years ago
  11. 0495424 supprt zero-length kmer setting by JavierJia · 12 years ago
  12. e83982b add clearLeadBit into KmerOperation by JavierJia · 12 years ago
  13. 3c3f2b7 Change return value of shiftKmer from bitmap to genecode by JavierJia · 12 years ago
  14. bc974c4 change comparitor by JavierJia · 12 years ago
  15. 25e22f1 add protect to array index overflow by JavierJia · 12 years ago
  16. 483934a add getSubKmer function by JavierJia · 12 years ago
  17. 0076326 add default empty constructor for hadoop version by JavierJia · 12 years ago
  18. 0a7f115 make genomix-hyracks pass the test by JavierJia · 12 years ago
  19. 2bfbe83 add back old version of Kmer to support genomix-pregelix by JavierJia · 12 years ago
  20. 0c37dd0 make genomix-hadoop genomix-hyracks compilable by JavierJia · 12 years ago
  21. be165dd split Kmer into fixsize Kmer and variablesize VKmer by JavierJia · 12 years ago
  22. 48a21c3 make genomix-data test passed by JavierJia · 12 years ago
  23. 97d4eed clear unset bit by Jianfeng Jia · 12 years ago
  24. 99641ad fix the bugs of mergeTwoKmer when nextK mod 4 == 0 by Jianfeng Jia · 12 years ago
  25. 74b72ca change fix bytes array to flexible bytes with offset and length in KmerUtil by jianfeng.jia@gmail.com · 12 years ago
  26. c410249 hadoop pathmerge h1 algorithm by zhangnan2920214@gmail.com · 12 years ago
  27. cdc5917 upload the graph of the test case by anbangx · 12 years ago
  28. 39e72c7 fix KmerUtil.mergeTwoKmer bug while merging 1byte nextKmer by jianfeng.jia@gmail.com · 12 years ago
  29. 4e57def add some comment on KmerUtil by jianfeng.jia@gmail.com · 12 years ago
  30. 14e6742 add shiftKmer into KmerUtil by jianfeng.jia@gmail.com · 12 years ago
  31. 4ead7d4 add convertion from bitmap to gencode by jianfeng.jia@gmail.com · 12 years ago
  32. 5842ee3 add KmerUtil for merge or join operation by jianfeng.jia@gmail.com · 12 years ago
  33. d5b6dc7 add reversed kmer option by jianfeng.jia@gmail.com · 12 years ago
  34. f1bf6d5 add timer by anbangx · 12 years ago
  35. 4604dee new genomix-data by zhangnan2920214@gmail.com · 12 years ago
  36. 7ed56e7 new genomix-data by zhangnan2920214@gmail.com · 12 years ago
  37. 6ed83cb fix sequecefile.reader problem by jianfeng.jia@gmail.com · 12 years ago
  38. 7b6a3c7 change to genomix-data by jianfeng.jia@gmail.com · 12 years ago