Log - c00e007e2931e7b06d89b03da5c29fa077b56fb8 - hyracks

5e01f76 Adapt RemoveLowCoverageVertex to new graph structure. Finally, all the patterns are adapted to new graph by Anbang Xu · 12 years ago
e7856d5 Adapt ScaffoldingVertex to new graph structure by Anbang Xu · 12 years ago
6212780 BTS almost done and wait for EdgeListWritable[dir].getReadIds(Key key) by Anbang Xu · 12 years ago
0217e7e Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat by Anbang Xu · 12 years ago
37a8489 Adapt MergeBubbleVertex to new graph structure. TODO: check if bubble flip and merge all metadata except kmer by Anbang Xu · 12 years ago
977a413 Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure by Anbang Xu · 12 years ago
4370b2b adapt TipAddVertex and TipRemoveVertex to new graph structure by Anbang Xu · 12 years ago
112cdf7 Adapt MapReduceVertex and P4 to new graph structure by Anbang Xu · 12 years ago
e7885ee Pregel TestSuite is completed by Anbang Xu · 12 years ago
6f88379 save current state and prepare to clean up hadoop test result by Anbang Xu · 12 years ago
52bda5c add new graph result to PathMergeTestSet by Anbang Xu · 12 years ago
be39f91 Add AverageCoverage to graph construction(hadoop) and make graphviz more pretty by Anbang Xu · 12 years ago
ac6b1a6 RemoveBridge pass test and add RemoveLowCoverage and Scaffolding by Anbang Xu · 12 years ago
4a5ee49 Hadoop TestSuite is completed and P2 pass test by Anbang Xu · 12 years ago
18c032a make TestSuite for graph building(hadoop) by Anbang Xu · 12 years ago
6ad60bf fix bug in readFields of KmerListWritable by Anbang Xu · 12 years ago
6d8afff fix RemoveBridgeVertex and update for merge by Anbang Xu · 12 years ago
aac7732 SimpleSplitRepeat is completed. An issue in graph building(hadoop): KmerList.appendList() doesn't check existed element by Anbang Xu · 12 years ago
0049eac refactor 'NaiveAlgorithm' to 'P1' and add test case for SplitRepeat by Anbang Xu · 12 years ago
29ebdc8 Map/Reduce version in pregel is completed by Anbang Xu · 12 years ago
a5e97c7 p4 pass test by Anbang Xu · 12 years ago
4416d3c debugging p4 by Anbang Xu · 12 years ago
c71a2d3 removeBridge pass tests by Anbang Xu · 12 years ago Alpha Alpha-Graph-v2.0
b1ccba9 p4 pass test by Anbang Xu · 12 years ago
b3c4a2b removeTip pass all the tests by Anbang Xu · 12 years ago
f947fb8 add test suite case for removetip/removebridge/pathmerge by Anbang Xu · 12 years ago
da3b802 Apply undirected graph algorithm in p2 by AnbangX · 12 years ago
e6d7e7a code review with Jake by AnbangX · 12 years ago
46fc86e add test cases for removeBridge, removeTip and mergeBubble by AnbangX · 12 years ago
cc77cf7 add test cases for path merge and other data clean patterns by AnbangX · 12 years ago
f60ef35 add test for graph build by AnbangX · 12 years ago
631482f add first small test case by AnbangX · 12 years ago
cfc37ee update new code and test in ipubmed by AnbangX · 12 years ago
ef51a0a reset maxIteration by AnbangX · 12 years ago
f11a472 add two step of log algorithm version by AnbangX · 12 years ago
9d5de1e add num-iteration by anbangx · 12 years ago
b7c1b11 Finish verifying the correctness of Naive Algorithm and Log Algorithm by anbangx · 12 years ago
f5ff29d change folder name to edu.uci.ics.genomix.pregelix by anbangx · 12 years ago
9ce8742 change code format of naive algorithm and delete some extra test code by anbangx · 12 years ago
8e25fd9 add client/drive and some test files by anbangx · 12 years ago
e125a7e add small data file by anbangx · 12 years ago
562c2fc by anbangx · 12 years ago
322e6d6 update by anbangx · 12 years ago
2e1af00 add a folder to store test file by anbangx · 12 years ago
a1bb02a add test file by anbangx · 12 years ago
648cedf Update LogAlgorithm for merging graph by anbangx · 12 years ago
7a14a81 Modify to SequenceFile by anbangx · 12 years ago
f61ba4c Update genomix-pregelix by anbangx · 12 years ago