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asterix-gerrit.ics.uci.edu / hyracks / ac6b1a6342aa6e1162cebf6631a83475ef1483a3 / genomix / genomix-hyracks / src
  1. ef306ca Fix case of AssembleKeyIntoNodeOperator by Nan Zhang · 12 years ago
  2. 5f57f54 small change by Nan Zhang · 12 years ago
  3. 19b758e ervoer testUtils by Nan Zhang · 12 years ago
  4. aeed6f0 delete the old driver by Nan Zhang · 12 years ago
  5. 852df2b complete the old code cleaning by Nan Zhang · 12 years ago
  6. 3e3144b cleanning continue by Nan Zhang · 12 years ago
  7. 7dc9400 clean the useless code for project by Nan Zhang · 12 years ago
  8. 6a7344b add 3 tips test cases for hyracks and add sequence file by Nan Zhang · 12 years ago
  9. 999f6ac add coverage for hyracks graph building by Nan Zhang · 12 years ago
  10. 53da888 code clean by Nan Zhang · 12 years ago
  11. 6ffdef2 add 3 SplitRepeat TestCases and fix the PositionListWitable: UnionUpdate HashSet by Nan Zhang · 12 years ago
  12. 016df5f finish the debugging by Nan Zhang · 12 years ago
  13. 0b9da1e Merge branch 'wbiesing/genomix/VKmers' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  14. c68e510 finish the debugging by Nan Zhang · 12 years ago
  15. 1259632 refactor KmerList -> VKmerList by Jake Biesinger · 12 years ago
  16. ceab4c1 Merge branch 'wbiesing/genomix/VKmers' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  17. 071ec27 modify the test parameter by Nan Zhang · 12 years ago
  18. 8379d7f add the read checker for hyracks by Nan Zhang · 12 years ago
  19. e90120f modify the test for graph building by Nan Zhang · 12 years ago
  20. 5a69e16 refactor graph building in hyracks using new genomix-data code by Nan Zhang · 12 years ago
  21. f2507bf debugging for hyracks by Nan Zhang · 12 years ago
  22. 8cea7fd new graph job built by Nan Zhang · 12 years ago
  23. 5b40242 build graph building job for hyracks by Nan Zhang · 12 years ago
  24. 0f33ece use new genomix-data by Nan Zhang · 12 years ago
  25. be0a038 modify the jobGeBrujinGraph by Nan Zhang · 12 years ago
  26. 3a0b4f2 fix key-value parser bug by Nan Zhang · 12 years ago
  27. a660b8b merge aggregater completes by Nan Zhang · 12 years ago
  28. 9b2c8b6 job generate frame complete by Nan Zhang · 12 years ago
  29. b811143 Refactor KmerBytesWritable to use internal length by Jake Biesinger · 12 years ago
  30. d8d3ccc local aggregator completed by Nan Zhang · 12 years ago
  31. 73ba093 delete the contrail package by Nan Zhang · 12 years ago
  32. ad0a538 complete the dataflow of hyracks by Nan Zhang · 12 years ago
  33. 4d50d8a Merge branch 'genomix/fullstack_genomix' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  34. 95138a4 hyracks contrail graph building partial completing by Nan Zhang · 12 years ago
  35. 0c644f4 Mapper passes test by Anbang Xu · 12 years ago
  36. b14e7e6 Update for changing graph by Anbang Xu · 12 years ago
  37. 8dbe728 refactor 'size' to 'kmerByteSize' in KmerBytesWritable by Anbang Xu · 12 years ago
  38. f7fc945 refactor 'UniqueKey' to 'NodeId' by Anbang Xu · 12 years ago
  39. 6350b0f some changes in ParserFactory by Anbang Xu · 12 years ago
  40. 1a02870 add ReadsKeyValueParserFactory for new graph using for read HDFS by Anbang Xu · 12 years ago
  41. 871743c add IntermediateNodeWritable and KmerListWritable by Anbang Xu · 12 years ago
  42. c642eeb new graph driver by Anbang Xu · 12 years ago
  43. 970c74f move old key/value class to oldtype folder by Anbang Xu · 12 years ago
  44. acde177 add unmerged option in hyracks graph building by Jianfeng Jia · 12 years ago
  45. bc7e15f Merge branch 'genomix/fullstack_genomix' into jianfeng/genomix by Jianfeng Jia · 12 years ago
  46. 0e69045 change iterator to for loop to save time. by Jianfeng Jia · 12 years ago
  47. bf8f525 Fix spelling by Jake Biesinger · 12 years ago
  48. c49f7b9 add warning of huge overlap by Jianfeng Jia · 12 years ago
  49. 471f75c remove the "new" block. by Jianfeng Jia · 12 years ago
  50. eb8d72a Merge commit '951870ef4642f2003c4240eeef702fc90600fe77' into nanzhang/genomix by Nan Zhang · 12 years ago
  51. 3a26a3a merge with jianfeng-reverse by Nan Zhang · 12 years ago
  52. a591f26 clean up code and add copyright header by JavierJia · 12 years ago
  53. bf9401e increase default frameSize to 128K by Jianfeng Jia · 12 years ago
  54. 8040709 add log to watch the tuple size by Jianfeng Jia · 12 years ago
  55. 12b4280 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  56. 5ba19e2 add more information for larger data debug by Jianfeng Jia · 12 years ago genomix/unidirection
  57. 8a50889 fix outputKmerFactory racing problem by Jianfeng Jia · 12 years ago
  58. 33dc862 fix debugNc script by JavierJia · 12 years ago
  59. dba2ebf Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  60. 22616cf fixed the racing problem by Jianfeng Jia · 12 years ago
  61. 763ee99 fix builder.reset bug by JavierJia · 12 years ago
  62. aa985fe Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  63. 1f37dce fix builder.reset bug by JavierJia · 12 years ago
  64. 1d7de64 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  65. 1be1d3e fix binary format test by JavierJia · 12 years ago
  66. f6640db Passed test by Jianfeng Jia · 12 years ago
  67. 562116a finished framework. not test yet by Jianfeng Jia · 12 years ago
  68. 8528899 finish framework by Jianfeng Jia · 12 years ago
  69. f14c403 add mergeNext function to kmerWritable by Jianfeng Jia · 12 years ago
  70. 7636684 refine the logic of generate Node by Jianfeng Jia · 12 years ago
  71. 529a089 finished EndToEnd test by Jianfeng Jia · 12 years ago
  72. 9804780 passed readid groupby test by Jianfeng Jia · 12 years ago
  73. 80b312a passed map kmer to readid operator by Jianfeng Jia · 12 years ago
  74. c2bb663 passed kmer groupby test by Jianfeng Jia · 12 years ago
  75. c5172dd reformat JobGen to avoid NonSerializable exception by Jianfeng Jia · 12 years ago
  76. ee2e038 finished test framework by JavierJia · 12 years ago
  77. 6b5f7a2 update the test to genomix-hyracks by JavierJia · 12 years ago
  78. 1d11e0a finish position test by JavierJia · 12 years ago
  79. 5d192ad finished genomix-hyracks end to end by JavierJia · 12 years ago
  80. e85c8a7 merge with hadoop code by JavierJia · 12 years ago
  81. fe1391a passed genomix-data test by JavierJia · 12 years ago
  82. ba0d0d8 clean up kmerWritable by JavierJia · 12 years ago
  83. d158252 finish design of NodeReferenc API by JavierJia · 12 years ago
  84. 4c33a7a finished framework by JavierJia · 12 years ago
  85. 136c411 finish mapKmerToReadID by JavierJia · 12 years ago
  86. d061bf1 make hyracks test pass by JavierJia · 12 years ago
  87. 950d05e add more testcase by AnbangX · 12 years ago
  88. 4803aea compatible with invalid read by Jianfeng Jia · 12 years ago
  89. 3c3f2b7 Change return value of shiftKmer from bitmap to genecode by JavierJia · 12 years ago
  90. 6050d12 export JAVA_HOME in script while by JavierJia · 12 years ago
  91. 5393870 change script of starting hyracks by jianfeng · 12 years ago
  92. 0a7f115 make genomix-hyracks pass the test by JavierJia · 12 years ago
  93. 0c37dd0 make genomix-hadoop genomix-hyracks compilable by JavierJia · 12 years ago
  94. 3e9c53e make genomix-hyracks test compilable by JavierJia · 12 years ago
  95. 3649da5 make genomix compile by buyingyi · 12 years ago
  96. 3c5bd0a make genomix compile with merged hyracks by buyingyi · 12 years ago
  97. cdc5917 upload the graph of the test case by anbangx · 12 years ago
  98. d5b6dc7 add reversed kmer option by jianfeng.jia@gmail.com · 12 years ago
  99. deb06a3 add -result-ip-address to script by jianfeng.jia@gmail.com · 12 years ago
  100. 3e17969 rewrite the DistributeAggeregator to not inherite from local by jianfeng.jia@gmail.com · 12 years ago