1. ac2e96e fix graphviz in mac OS by Anbang Xu · 12 years ago
  2. a3f2453 add OSvalidator for graphviz by Nan Zhang · 12 years ago
  3. 139234c fix the bug of hyracks_inputformat opts by Nan Zhang · 12 years ago
  4. d309f00 add tandem repeat cases for hyracks graphbuilding by Jake Biesinger · 12 years ago
  5. 1280087 fixed hyracks graphbuild tests by Jake Biesinger · 12 years ago
  6. 5236ed2 remove default values for output format of hyracks graph build by Nan Zhang · 12 years ago
  7. c33e4b7 add option for hyracks driver to have text output by Nan Zhang · 12 years ago
  8. 943109c Merge branch 'nanzhang/hyracks_genomix' of https://code.google.com/p/hyracks into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  9. d7ded9c small change on hyracks_genomix by Nan Zhang · 12 years ago
  10. 98edaf9 add sinlgelongread test set by Nan Zhang · 12 years ago
  11. b38f2fb add getclassloader() log for hyracks' driver by Nan Zhang · 12 years ago
  12. b01f8e8 change the stat package name in graph building of hyracks by Nan Zhang · 12 years ago
  13. 2e63796 add graphviz mac version for graph building of hyracks by Nan Zhang · 12 years ago
  14. 9f9151c Merge remote-tracking branch 'origin/genomix/fullstack_genomix' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  15. 1c3f990 add sinlgelongread test set by Nan Zhang · 12 years ago
  16. f8f20fa add getclassloader() log for hyracks' driver by Nan Zhang · 12 years ago
  17. 11cfa9f change the stat package name in graph building of hyracks by Nan Zhang · 12 years ago
  18. 772cebd add graphviz mac version for graph building of hyracks by Nan Zhang · 12 years ago
  19. a9f475d use $IO_DIRS, not -coresPerMachine for hyracks partitions + hadoop #reducers by Jake Biesinger · 12 years ago
  20. a56a98a read FRAME_SIZE and FRAME_LIMIT from cluster.properties by Jake Biesinger · 12 years ago
  21. b8ec304 fix framesize: 256MB buffer, 64k page by Jake Biesinger · 12 years ago
  22. a32d7ce adjust job history size by Nan Zhang · 12 years ago
  23. b6ca725 add the option of frame size by Nan Zhang · 12 years ago
  24. 6a6ff67 modify the option of NlinesPerMap to false by Nan Zhang · 12 years ago
  25. cf91139 remove incorrect expected file by Nan Zhang · 12 years ago
  26. 73793d5 small change for rebase by Nan Zhang · 12 years ago
  27. daa7780 fix NLineInputFormat for real by Jake Biesinger · 12 years ago
  28. 6ec5f66 don't use NLineInputFormat for now by Jake Biesinger · 12 years ago
  29. 270d47a add NlineInputFormat by Nan Zhang · 12 years ago
  30. 014dafc add graph building checking job by Nan Zhang · 12 years ago
  31. d980562 small clean for genomix-hyracks code by Nan Zhang · 12 years ago
  32. 251ecde harden hryacks scripts a bit by Jake Biesinger · 12 years ago
  33. fdf2c25 stable running with partition 4 by Nan Zhang · 12 years ago
  34. 4c7fca6 add hadoop conf into the genomix-hyracks scripts by Nan Zhang · 12 years ago
  35. 1e86fe0 choose the unmerge_graphbuilding for genomix-driver by Nan Zhang · 12 years ago
  36. 06b3fa5 fix jobGenDebruijnGraph output format by Jake Biesinger · 12 years ago
  37. 639c806 separate config from driver and pipeline setup by Jake Biesinger · 12 years ago
  38. 1aad534 Update GenomixJobConf: must specify the kmerLength, extends JobConf by Jake Biesinger · 12 years ago
  39. 4f05864 Refactor configuration for all jobs into global GenomixJobConf by Jake Biesinger · 12 years ago
  40. fc7d4b8 fix the positionWritable unionUpdate(), and add automatic test case by Nan Zhang · 12 years ago
  41. c00e007 add graphviz by Nan Zhang · 12 years ago
  42. a4e850d add license header for hyracks by Nan Zhang · 12 years ago
  43. 15306ff small modification by Nan Zhang · 12 years ago
  44. 4903be0 add expected file by Nan Zhang · 12 years ago
  45. df21153 complete hyracks graph building Junit4 Testing normalization by Nan Zhang · 12 years ago
  46. 3786935 hyracks graph building test complete. by Nan Zhang · 12 years ago
  47. 128eb0e Revert "update hyracks_genomix branch" by Nan Zhang · 12 years ago
  48. 9a664b7 update hyracks_genomix branch by Nan Zhang · 12 years ago
  49. c448987 refactoring edgelists; still some to do by Jake Biesinger · 12 years ago
  50. 034979c Partial refactor following edge type changes in NodeWritable by Jake Biesinger · 12 years ago
  51. 14df82f Merge branch 'nanzhang/hyracks_genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  52. d282e07 argumented graph building pass test successfully by Nan Zhang · 12 years ago
  53. b965efd modify pom by Nan Zhang · 12 years ago
  54. 88d6cb5 modify the pom by Nan Zhang · 12 years ago
  55. 7f3e343 add the unmerged graph job by Nan Zhang · 12 years ago
  56. 399fc4a NodeWritable: refactor getListFromDir to getEdgeList by Jake Biesinger · 12 years ago
  57. 211d79c use direction flag as only public interface for nodewritable edges and threads by Jake Biesinger · 12 years ago
  58. 2065960 NodeWritable: Remove nodeIdList, refactor edges, add threads, add start/end reads by Jake Biesinger · 12 years ago
  59. e35e302 add driver by Nan Zhang · 12 years ago
  60. b4c6e09 Complete the Argumented graph building by Nan Zhang · 12 years ago
  61. 62a61f6 NodeWritable: refactor getListFromDir to getEdgeList by Jake Biesinger · 12 years ago
  62. 64f07c9 use direction flag as only public interface for nodewritable edges and threads by Jake Biesinger · 12 years ago
  63. 47fc29c NodeWritable: Remove nodeIdList, refactor edges, add threads, add start/end reads by Jake Biesinger · 12 years ago
  64. 8ded1a3 Clean genomix package and complete mergeing with Master by Anbang Xu · 12 years ago
  65. dfd2e50 fix genomix pom.xml's to use 0.2.10-SNAPSHOT by Jake Biesinger · 12 years ago
  66. 153c2d5 add expected results by Nan Zhang · 12 years ago
  67. ef306ca Fix case of AssembleKeyIntoNodeOperator by Nan Zhang · 12 years ago
  68. 5f57f54 small change by Nan Zhang · 12 years ago
  69. 19b758e ervoer testUtils by Nan Zhang · 12 years ago
  70. aeed6f0 delete the old driver by Nan Zhang · 12 years ago
  71. 852df2b complete the old code cleaning by Nan Zhang · 12 years ago
  72. 3e3144b cleanning continue by Nan Zhang · 12 years ago
  73. 7dc9400 clean the useless code for project by Nan Zhang · 12 years ago
  74. 6a7344b add 3 tips test cases for hyracks and add sequence file by Nan Zhang · 12 years ago
  75. 999f6ac add coverage for hyracks graph building by Nan Zhang · 12 years ago
  76. 53da888 code clean by Nan Zhang · 12 years ago
  77. 6ffdef2 add 3 SplitRepeat TestCases and fix the PositionListWitable: UnionUpdate HashSet by Nan Zhang · 12 years ago
  78. 016df5f finish the debugging by Nan Zhang · 12 years ago
  79. 0b9da1e Merge branch 'wbiesing/genomix/VKmers' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  80. c68e510 finish the debugging by Nan Zhang · 12 years ago
  81. 1259632 refactor KmerList -> VKmerList by Jake Biesinger · 12 years ago
  82. ceab4c1 Merge branch 'wbiesing/genomix/VKmers' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  83. 071ec27 modify the test parameter by Nan Zhang · 12 years ago
  84. 8379d7f add the read checker for hyracks by Nan Zhang · 12 years ago
  85. e90120f modify the test for graph building by Nan Zhang · 12 years ago
  86. 5a69e16 refactor graph building in hyracks using new genomix-data code by Nan Zhang · 12 years ago
  87. f2507bf debugging for hyracks by Nan Zhang · 12 years ago
  88. 8cea7fd new graph job built by Nan Zhang · 12 years ago
  89. 5b40242 build graph building job for hyracks by Nan Zhang · 12 years ago
  90. 0f33ece use new genomix-data by Nan Zhang · 12 years ago
  91. be0a038 modify the jobGeBrujinGraph by Nan Zhang · 12 years ago
  92. 3a0b4f2 fix key-value parser bug by Nan Zhang · 12 years ago
  93. a660b8b merge aggregater completes by Nan Zhang · 12 years ago
  94. 9b2c8b6 job generate frame complete by Nan Zhang · 12 years ago
  95. b811143 Refactor KmerBytesWritable to use internal length by Jake Biesinger · 12 years ago
  96. d8d3ccc local aggregator completed by Nan Zhang · 12 years ago
  97. 73ba093 delete the contrail package by Nan Zhang · 12 years ago
  98. ad0a538 complete the dataflow of hyracks by Nan Zhang · 12 years ago
  99. 4d50d8a Merge branch 'genomix/fullstack_genomix' into nanzhang/hyracks_genomix by Nan Zhang · 12 years ago
  100. 95138a4 hyracks contrail graph building partial completing by Nan Zhang · 12 years ago