- e53a2fb Try to use check condition in vertex state instead of give a isHalt state flag, but it occurs some errors by Anbang Xu · 12 years ago
- 5e03163 Add logging.properties to genomix-driver by Anbang Xu · 12 years ago
- 30ecc2d Refactore FineOnlyFormatter to PathMergeFormatter by Anbang Xu · 12 years ago
- 20a80e6 standardize logging across eclipse-test, eclipse-main, and maven by Jake Biesinger · 12 years ago
- df811e5 add SymmetryChecker by Anbang Xu · 12 years ago
- 6c79239 add AAA testcase by Anbang Xu · 12 years ago
- 1a7bc8b Fix a bug in sendUpdateMsg(). setMergeDir should be in the front of sendUpdateMsg by Anbang Xu · 12 years ago
- 4b21369 Fix TandemRepeatAndCycle bug by Anbang Xu · 12 years ago
- 63e5756 add lock to fakenode exist check by Anbang Xu · 12 years ago
- db7f854 clean up useless code by Anbang Xu · 12 years ago
- 24f2ead add boolean flag to switch method between P2 and P4 by Anbang Xu · 12 years ago
- 2acd0b6 Fix one bug in P2/P4 by Anbang Xu · 12 years ago
- d5f760c add p2 graph input format, initiate prependMergeNode and appendMergeNode by Anbang Xu · 12 years ago
- 01c5e31 add subclass V to extend VertexValueWritable by Anbang Xu · 12 years ago
- 7a47e8b Begin to debug P2 by Anbang Xu · 12 years ago
- 52a279f Aggregator passes test by Anbang Xu · 12 years ago
- 67688c3 remove the genomix-pregelix testcase config files (again) by Jake Biesinger · 12 years ago
- 17b99f2 add stop haltNode in pathmerge and fix the bug Jake mentioned by Anbang Xu · 12 years ago
- 9dec13e remove generated genomix-pregel test case xml files by Jake Biesinger · 12 years ago
- c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
- 1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
- b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
- 32a956b fix one bug in path merge by Anbang Xu · 12 years ago
- 5747845 Pregelix JobGenerator uses proper GenomixJobConf by Jake Biesinger · 12 years ago
- 6fc84f1 Add additional merge info to pathmerge by Anbang Xu · 12 years ago
- ced394a Make pathmerge robost by Anbang Xu · 12 years ago
- b37b705 Add UnRollTandemRepeat. TODO: add the corresponding MSG and update edges by Anbang Xu · 12 years ago
- 5e01f76 Adapt RemoveLowCoverageVertex to new graph structure. Finally, all the patterns are adapted to new graph by Anbang Xu · 12 years ago
- e7856d5 Adapt ScaffoldingVertex to new graph structure by Anbang Xu · 12 years ago
- 6212780 BTS almost done and wait for EdgeListWritable[dir].getReadIds(Key key) by Anbang Xu · 12 years ago
- 0217e7e Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat by Anbang Xu · 12 years ago
- 977a413 Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure by Anbang Xu · 12 years ago
- 112cdf7 Adapt MapReduceVertex and P4 to new graph structure by Anbang Xu · 12 years ago
- e7885ee Pregel TestSuite is completed by Anbang Xu · 12 years ago
- 6f88379 save current state and prepare to clean up hadoop test result by Anbang Xu · 12 years ago
- 0d72095 Make generic message class for all patterns by Anbang Xu · 12 years ago
- b1c9c7d P1ForPathMergeVertex is completed, but one issue about even length and message from both size can't be solve by Anbang Xu · 12 years ago
- bb8e581 Complete NaiveBFSTraverse and make more test cases by Anbang Xu · 12 years ago
- 361916b save current state by Anbang Xu · 12 years ago
- 52bda5c add new graph result to PathMergeTestSet by Anbang Xu · 12 years ago
- 580f6cd add vertex.activate() to notice update and change DirectionFlag to 2 bits by Anbang Xu · 12 years ago
- ac6b1a6 RemoveBridge pass test and add RemoveLowCoverage and Scaffolding by Anbang Xu · 12 years ago
- 61bfb93 add computeSimilarity and mergeAverageCoverage to MergeBubbleVertex by Anbang Xu · 12 years ago
- 6ee7bdf fix HashSet in SplitRepeat by Anbang Xu · 12 years ago
- 9db1ea8 merge MapReduceVertex to p2 and p2 is completed by Anbang Xu · 12 years ago
- 29ebdc8 Map/Reduce version in pregel is completed by Anbang Xu · 12 years ago
- 1307443 P2 pass test1,2,3,4 by Anbang Xu · 12 years ago
- a5e97c7 p4 pass test by Anbang Xu · 12 years ago
- 4416d3c debugging p4 by Anbang Xu · 12 years ago
- c71a2d3 removeBridge pass tests by Anbang Xu · 12 years ago Alpha Alpha-Graph-v2.0
- b1ccba9 p4 pass test by Anbang Xu · 12 years ago
- b3c4a2b removeTip pass all the tests by Anbang Xu · 12 years ago
- f947fb8 add test suite case for removetip/removebridge/pathmerge by Anbang Xu · 12 years ago
- e6d7e7a code review with Jake by AnbangX · 12 years ago
- 7984e2b p3 path merge pass test by AnbangX · 12 years ago
- 46fc86e add test cases for removeBridge, removeTip and mergeBubble by AnbangX · 12 years ago
- cc77cf7 add test cases for path merge and other data clean patterns by AnbangX · 12 years ago
- f60ef35 add test for graph build by AnbangX · 12 years ago
- 4b84334 format the code by AnbangX · 12 years ago
- eae1289 add testcase by AnbangX · 12 years ago
- 950d05e add more testcase by AnbangX · 12 years ago
- 02b2df5 add testcase by AnbangX · 12 years ago
- f11a472 add two step of log algorithm version by AnbangX · 12 years ago
- 70812cd fix some bugs of log algorithm and prepare to verify the correctness in big data by AnbangX · 12 years ago
- c07e482 delete unuse function by anbangx · 12 years ago
- f5ff29d change folder name to edu.uci.ics.genomix.pregelix by anbangx · 12 years ago
- aa919f9 add topology.xml by anbangx · 12 years ago
- dd49ed0 delete old file by anbangx · 12 years ago
- b82f054 Update by anbangx · 12 years ago
- 648cedf Update LogAlgorithm for merging graph by anbangx · 12 years ago
- f61ba4c Update genomix-pregelix by anbangx · 12 years ago