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asterix-gerrit.ics.uci.edu / hyracks / 9dec13ef59a9518378d883a97fc68d15d6e17f2a
  1. 9dec13e remove generated genomix-pregel test case xml files by Jake Biesinger · 12 years ago
  2. c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  3. 1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
  4. b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
  5. fc4fe25 add failing pathmerge testcase by Jake Biesinger · 12 years ago
  6. 32a956b fix one bug in path merge by Anbang Xu · 12 years ago
  7. 630586c add test case for synthetic data by Jake Biesinger · 12 years ago
  8. d75565c add option for corespermachine in jobconf by Nan Zhang · 12 years ago
  9. d980562 small clean for genomix-hyracks code by Nan Zhang · 12 years ago
  10. 21c3906 genomix-driver copies results to text by Jake Biesinger · 12 years ago
  11. 5747845 Pregelix JobGenerator uses proper GenomixJobConf by Jake Biesinger · 12 years ago
  12. 96eab83 Merge branch 'anbangx/backupMergingWithMaster' into wbiesing/driver_backup_merge by Jake Biesinger · 12 years ago
  13. 26e7332 BubbleMerge test is almost finished except grid test case by Anbang Xu · 12 years ago
  14. 0d6afba remove minidfs cluster (so writing directly to lcoal disk now) by Jake Biesinger · 12 years ago
  15. 34c19fd refactoring local mode by Jake Biesinger · 12 years ago
  16. ab0b235 test Rectangle by Anbang Xu · 12 years ago
  17. febbaf1 add EdgeListWritable.addUnion(edge) by Jake Biesinger · 12 years ago
  18. 85dfedf Add broadcaseKillselfAndNoticeToUpdateEdges and responseToDeadVertexAndUpdateEdges by Anbang Xu · 12 years ago
  19. 2075152 add .tar.gz as an assembly target by Jake Biesinger · 12 years ago
  20. a332dbe copy conf directory into binary assembly output by Jake Biesinger · 12 years ago
  21. 4e22bc4 genomix driver takes a directory as local input by Jake Biesinger · 12 years ago
  22. 002533a genomix driver -ip and -runLocal are mutually exclusive by Jake Biesinger · 12 years ago
  23. 3e1eb90 change bubble merge "add" to use boolean `flip` by Jake Biesinger · 12 years ago
  24. c0b37b1 change bubble's pre-condition -- pathNode to anyNode by Anbang Xu · 12 years ago
  25. 97d97cd add bubble's addReadIDs by Jake Biesinger · 12 years ago
  26. e763a06 add complicated test case for BubbleMerge by Anbang Xu · 12 years ago
  27. 51a0502 separate genomix driver in/out to local/hdfs by Jake Biesinger · 12 years ago
  28. 34feeb2 add hyracks .properties and scripts to genomix-driver by Jake Biesinger · 12 years ago
  29. 251ecde harden hryacks scripts a bit by Jake Biesinger · 12 years ago
  30. 1e8c661 driver pom generates cc and nc scripts by Jake Biesinger · 12 years ago
  31. 9071ad4 Merge branch 'nanzhang/hyracks_genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  32. fdf2c25 stable running with partition 4 by Nan Zhang · 12 years ago
  33. c7c196d remove patch.diff by Jake Biesinger · 12 years ago
  34. 25a66b3 stop removing `expected` dir during clean (used for testing) by Jake Biesinger · 12 years ago
  35. fad8c77 update genomix-driver pom to use auto-generated script by Jake Biesinger · 12 years ago
  36. 6ddc6cc testing BubbleMerge by Anbang Xu · 12 years ago
  37. 3aba0f0 SplitRepeat test is completed by Anbang Xu · 12 years ago
  38. 0ca485b Don't use l1 and l2 in VKmerBytesWritable by Anbang Xu · 12 years ago
  39. 5800f2b Merge branch 'master' into anbangx/backupMergingWithMaster by Anbang Xu · 12 years ago
  40. 0ea5c92 Remove pregel dependence on hadoop and hyracks by Anbang Xu · 12 years ago
  41. 41ffd05 Merge with main branch by Anbang Xu · 12 years ago
  42. 4a9e45c Add testcases for SplitRepeat by Anbang Xu · 12 years ago
  43. 6aae1de don't use root HDFS path by Jake Biesinger · 12 years ago
  44. 6d42a69 add medification on jobconf by Nan Zhang · 12 years ago
  45. 8270c5a Merge cycle to a single node in path merge. P4 test is completed by Anbang Xu · 12 years ago
  46. 4c7fca6 add hadoop conf into the genomix-hyracks scripts by Nan Zhang · 12 years ago
  47. d688b5a Add skip tandem repeat to pathmerge. TODO: detect cycle in pathmerge by Anbang Xu · 12 years ago
  48. 971c984 genomix driver actually uses cmdline args by Jake Biesinger · 12 years ago
  49. b2d89d1 remove junit and pmcommon dependencies by Jake Biesinger · 12 years ago
  50. 74dd489 fix appassembler for pregelix by Jake Biesinger · 12 years ago
  51. 3038537 appassembler for genomix driver by Jake Biesinger · 12 years ago
  52. adac3ef modify path for static test in driver by Jake Biesinger · 12 years ago
  53. 87b679f Merge branch 'anbangx/fullstack_genomix' into wbiesing/driver by Jake Biesinger · 12 years ago
  54. 2f3e3bb PathMerge pass test except TandemRepeat. TODO: skip TandemRepeat in pathmerge by Anbang Xu · 12 years ago
  55. 03434ff add hyracks-built graph as a pregelix test case by Jake Biesinger · 12 years ago
  56. 6c997b7 Fix kmer used in minicluster by Jake Biesinger · 12 years ago
  57. c9fe0a9 driver adapts to build output (InitialGraphInputFormat) by Jake Biesinger · 12 years ago
  58. 9c01d09 Fix mergeReadID RF and RR by Jake Biesinger · 12 years ago
  59. 569945a add RF/FR with/without head test for pathmerge by Anbang Xu · 12 years ago
  60. 1e86fe0 choose the unmerge_graphbuilding for genomix-driver by Nan Zhang · 12 years ago
  61. 7a75b07 add updateEdges for pathmerge. Issue: mergeWithStartreads by Anbang Xu · 12 years ago
  62. 9ac0dda Modify mergeWithKmer to mergeWithNode by Anbang Xu · 12 years ago
  63. 909de70 Merge branch 'master' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
  64. 2e92709 remove bogus reference to com.sun.tools.javac.util.List by Jake Biesinger · 12 years ago
  65. 6fc84f1 Add additional merge info to pathmerge by Anbang Xu · 12 years ago
  66. d06c50f add testcase for pathmerge by Anbang Xu · 12 years ago
  67. fea8393 add unrollTandem to driver by Jake Biesinger · 12 years ago
  68. bb9901e re-remove nodes cleared out of Anbang's branch by Jake Biesinger · 12 years ago
  69. 5894562 GenomixDriver uses simpler pipeline builder by Jake Biesinger · 12 years ago
  70. b7d6d4f add convenience functions for new Jobs in genomix-pregelix operators by Jake Biesinger · 12 years ago
  71. d4fa74b Driver can run pregelix or Hyracks jobs locally by Jake Biesinger · 12 years ago
  72. 2accbdf remove constants from new pregelix code by Jake Biesinger · 12 years ago
  73. 58a483d remove old config files by Jake Biesinger · 12 years ago
  74. 06b3fa5 fix jobGenDebruijnGraph output format by Jake Biesinger · 12 years ago
  75. b1d8071 GenomixDriver: hryacks runs but can't find input by Jake Biesinger · 12 years ago
  76. 6eade1d use local test cluster by Jake Biesinger · 12 years ago
  77. 639c806 separate config from driver and pipeline setup by Jake Biesinger · 12 years ago
  78. 11c499b Add license header by Jake Biesinger · 12 years ago
  79. 1aad534 Update GenomixJobConf: must specify the kmerLength, extends JobConf by Jake Biesinger · 12 years ago
  80. 4f05864 Refactor configuration for all jobs into global GenomixJobConf by Jake Biesinger · 12 years ago
  81. 56e291f Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by Anbang Xu · 12 years ago
  82. ced394a Make pathmerge robost by Anbang Xu · 12 years ago
  83. ca15771 UnrollTandemRepeat is completed by Anbang Xu · 12 years ago
  84. b37b705 Add UnRollTandemRepeat. TODO: add the corresponding MSG and update edges by Anbang Xu · 12 years ago
  85. fc7d4b8 fix the positionWritable unionUpdate(), and add automatic test case by Nan Zhang · 12 years ago
  86. a81ddbc clean up the checkpointing control by buyingyi · 12 years ago
  87. 225a9dc Merge branch 'master' into yingyi/fullstack_fix by buyingyi · 12 years ago
  88. 15e90bb fix test jobs by buyingyi · 12 years ago
  89. 0a23941 print the full stack trace when failures propagate to pregelix driver by buyingyi · 12 years ago
  90. c900686 Merge branch 'yingyi/fullstack_fix' of https://code.google.com/p/hyracks into yingyi/fullstack_fix by buyingyi · 12 years ago
  91. 204eda8 implemented checkpoint read by buyingyi · 12 years ago
  92. 6efa434 Completed P2 debugging by Anbang Xu · 12 years ago
  93. c00e007 add graphviz by Nan Zhang · 12 years ago
  94. 78e8552 Merge branch 'salsubaiee/master_flush_frames_in_feeds_rapidly' by salsubaiee · 12 years ago
  95. 5b061f3 Removed uneeded check. by salsubaiee · 12 years ago
  96. e3351ad avoid hidden error message by sigmod · 12 years ago
  97. a4e850d add license header for hyracks by Nan Zhang · 12 years ago
  98. ca84702 Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by Anbang Xu · 12 years ago
  99. a3c0538 Clean up P2 code and prepare to deep debug it by Anbang Xu · 12 years ago
  100. feec5be Fix BubbleMerge by Anbang Xu · 12 years ago