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hyracks
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8ded1a3c6251463e9478f4c79106fd01a2e4b7c3
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genomix
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genomix-pregelix
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data
be39f91
Add AverageCoverage to graph construction(hadoop) and make graphviz more pretty
by Anbang Xu
· 12 years ago
ac6b1a6
RemoveBridge pass test and add RemoveLowCoverage and Scaffolding
by Anbang Xu
· 12 years ago
4a5ee49
Hadoop TestSuite is completed and P2 pass test
by Anbang Xu
· 12 years ago
18c032a
make TestSuite for graph building(hadoop)
by Anbang Xu
· 12 years ago
6ad60bf
fix bug in readFields of KmerListWritable
by Anbang Xu
· 12 years ago
6d8afff
fix RemoveBridgeVertex and update for merge
by Anbang Xu
· 12 years ago
aac7732
SimpleSplitRepeat is completed. An issue in graph building(hadoop): KmerList.appendList() doesn't check existed element
by Anbang Xu
· 12 years ago
0049eac
refactor 'NaiveAlgorithm' to 'P1' and add test case for SplitRepeat
by Anbang Xu
· 12 years ago
29ebdc8
Map/Reduce version in pregel is completed
by Anbang Xu
· 12 years ago
a5e97c7
p4 pass test
by Anbang Xu
· 12 years ago
4416d3c
debugging p4
by Anbang Xu
· 12 years ago
c71a2d3
removeBridge pass tests
by Anbang Xu
· 12 years ago
Alpha
Alpha-Graph-v2.0
b1ccba9
p4 pass test
by Anbang Xu
· 12 years ago
b3c4a2b
removeTip pass all the tests
by Anbang Xu
· 12 years ago
f947fb8
add test suite case for removetip/removebridge/pathmerge
by Anbang Xu
· 12 years ago
da3b802
Apply undirected graph algorithm in p2
by AnbangX
· 12 years ago
e6d7e7a
code review with Jake
by AnbangX
· 12 years ago
46fc86e
add test cases for removeBridge, removeTip and mergeBubble
by AnbangX
· 12 years ago
cc77cf7
add test cases for path merge and other data clean patterns
by AnbangX
· 12 years ago
f60ef35
add test for graph build
by AnbangX
· 12 years ago
631482f
add first small test case
by AnbangX
· 12 years ago
cfc37ee
update new code and test in ipubmed
by AnbangX
· 12 years ago
ef51a0a
reset maxIteration
by AnbangX
· 12 years ago
f11a472
add two step of log algorithm version
by AnbangX
· 12 years ago
9d5de1e
add num-iteration
by anbangx
· 12 years ago
b7c1b11
Finish verifying the correctness of Naive Algorithm and Log Algorithm
by anbangx
· 12 years ago
f5ff29d
change folder name to edu.uci.ics.genomix.pregelix
by anbangx
· 12 years ago
9ce8742
change code format of naive algorithm and delete some extra test code
by anbangx
· 12 years ago
8e25fd9
add client/drive and some test files
by anbangx
· 12 years ago
e125a7e
add small data file
by anbangx
· 12 years ago
562c2fc
by anbangx
· 12 years ago
322e6d6
update
by anbangx
· 12 years ago
2e1af00
add a folder to store test file
by anbangx
· 12 years ago
a1bb02a
add test file
by anbangx
· 12 years ago
648cedf
Update LogAlgorithm for merging graph
by anbangx
· 12 years ago
7a14a81
Modify to SequenceFile
by anbangx
· 12 years ago
f61ba4c
Update genomix-pregelix
by anbangx
· 12 years ago