Log - 476760d0320dbb1cf456a0e3e62c6380c8894e57 - hyracks

8c187a6 add RandonWalk test case by Anbang Xu · 12 years ago
39cfc58 add synthetic test case by Jake Biesinger · 12 years ago
b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
32a956b fix one bug in path merge by Anbang Xu · 12 years ago
26e7332 BubbleMerge test is almost finished except grid test case by Anbang Xu · 12 years ago
c0b37b1 change bubble's pre-condition -- pathNode to anyNode by Anbang Xu · 12 years ago
e763a06 add complicated test case for BubbleMerge by Anbang Xu · 12 years ago
6ddc6cc testing BubbleMerge by Anbang Xu · 12 years ago
3aba0f0 SplitRepeat test is completed by Anbang Xu · 12 years ago
4a9e45c Add testcases for SplitRepeat by Anbang Xu · 12 years ago
d688b5a Add skip tandem repeat to pathmerge. TODO: detect cycle in pathmerge by Anbang Xu · 12 years ago
569945a add RF/FR with/without head test for pathmerge by Anbang Xu · 12 years ago
9ac0dda Modify mergeWithKmer to mergeWithNode by Anbang Xu · 12 years ago
d06c50f add testcase for pathmerge by Anbang Xu · 12 years ago
de3a280 Merge branch 'nanzhang/hyracks_genomix' into genomix/fullstack_genomix by Nan Zhang · 12 years ago
e7856d5 Adapt ScaffoldingVertex to new graph structure by Anbang Xu · 12 years ago
0217e7e Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat by Anbang Xu · 12 years ago
977a413 Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure by Anbang Xu · 12 years ago
128eb0e Revert "update hyracks_genomix branch" by Nan Zhang · 12 years ago
9a664b7 update hyracks_genomix branch by Nan Zhang · 12 years ago
585dbb5 fastq parser for hadoop graphbuild by Jake Biesinger · 12 years ago
58875bf delete SelfPath.txt~ by Anbang Xu · 12 years ago
202f2ab Hadoop graphbuild uses filename for mateid; tests by Jake Biesinger · 12 years ago
2d17c5b Complete the Graph construction(Hadoop) by Anbang Xu · 12 years ago
13348bf Graph construcion is completed by Anbang Xu · 12 years ago
67c7e22 debuging SplitRepeatVertex by Anbang Xu · 12 years ago
bb8e581 Complete NaiveBFSTraverse and make more test cases by Anbang Xu · 12 years ago
be39f91 Add AverageCoverage to graph construction(hadoop) and make graphviz more pretty by Anbang Xu · 12 years ago
ac6b1a6 RemoveBridge pass test and add RemoveLowCoverage and Scaffolding by Anbang Xu · 12 years ago
4a5ee49 Hadoop TestSuite is completed and P2 pass test by Anbang Xu · 12 years ago
6981f1c adapt graph construction(hadoop) to VKmer by Anbang Xu · 12 years ago
9f949c4 MergeBubbleVertex half done by Anbang Xu · 12 years ago
ac6a090 Fix BubbleAddVertex and pass test by Anbang Xu · 12 years ago
aac7732 SimpleSplitRepeat is completed. An issue in graph building(hadoop): KmerList.appendList() doesn't check existed element by Anbang Xu · 12 years ago
0049eac refactor 'NaiveAlgorithm' to 'P1' and add test case for SplitRepeat by Anbang Xu · 12 years ago
a5e97c7 p4 pass test by Anbang Xu · 12 years ago
4416d3c debugging p4 by Anbang Xu · 12 years ago
dfa14d3 Fix NodeWritable and Finish contrail-graph Mapper/Reducer by Anbang Xu · 12 years ago genomix/velvet-graph-pregel
f7a23e4 add Reducer and change PositionWritable to PositionListWritable in NodeWritable by Anbang Xu · 12 years ago
37cc20b hadoop graph building completion by Nan Zhang · 12 years ago
1181e3c modify the driver of velvet_graphbuilding by Nan Zhang · 12 years ago
c9d802a Remove mac .DS_Store files and ignore them in the future. by Jake Biesinger · 12 years ago
be015c7 add new data by hadoop · 12 years ago
13bdf01 delete the data by hadoop · 12 years ago
a3a8958 new h2 modified by hadoop · 12 years ago
9832f24 delete actual by hadoop · 12 years ago
3c2876f make h1 test case pass by hadoop · 12 years ago
8a89876 hadoop pathmerge h1 algorithm by zhangnan2920214@gmail.com · 12 years ago
cf793ad sequential file format by zhangnan2920214@gmail.com · 12 years ago
f149d8f create svn dir by zhangnan2920214@gmail.com · 12 years ago
8ed1c1f reconstruct the code directory by jianfeng.jia@gmail.com · 13 years ago