1. 9dec13e remove generated genomix-pregel test case xml files by Jake Biesinger · 12 years ago
  2. c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  3. 1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
  4. b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
  5. 32a956b fix one bug in path merge by Anbang Xu · 12 years ago
  6. 5747845 Pregelix JobGenerator uses proper GenomixJobConf by Jake Biesinger · 12 years ago
  7. 6fc84f1 Add additional merge info to pathmerge by Anbang Xu · 12 years ago
  8. ced394a Make pathmerge robost by Anbang Xu · 12 years ago
  9. b37b705 Add UnRollTandemRepeat. TODO: add the corresponding MSG and update edges by Anbang Xu · 12 years ago
  10. 5e01f76 Adapt RemoveLowCoverageVertex to new graph structure. Finally, all the patterns are adapted to new graph by Anbang Xu · 12 years ago
  11. e7856d5 Adapt ScaffoldingVertex to new graph structure by Anbang Xu · 12 years ago
  12. 6212780 BTS almost done and wait for EdgeListWritable[dir].getReadIds(Key key) by Anbang Xu · 12 years ago
  13. 0217e7e Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat by Anbang Xu · 12 years ago
  14. 977a413 Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure by Anbang Xu · 12 years ago
  15. 112cdf7 Adapt MapReduceVertex and P4 to new graph structure by Anbang Xu · 12 years ago
  16. e7885ee Pregel TestSuite is completed by Anbang Xu · 12 years ago
  17. 6f88379 save current state and prepare to clean up hadoop test result by Anbang Xu · 12 years ago
  18. 0d72095 Make generic message class for all patterns by Anbang Xu · 12 years ago
  19. b1c9c7d P1ForPathMergeVertex is completed, but one issue about even length and message from both size can't be solve by Anbang Xu · 12 years ago
  20. bb8e581 Complete NaiveBFSTraverse and make more test cases by Anbang Xu · 12 years ago
  21. 361916b save current state by Anbang Xu · 12 years ago
  22. 52bda5c add new graph result to PathMergeTestSet by Anbang Xu · 12 years ago
  23. 580f6cd add vertex.activate() to notice update and change DirectionFlag to 2 bits by Anbang Xu · 12 years ago
  24. ac6b1a6 RemoveBridge pass test and add RemoveLowCoverage and Scaffolding by Anbang Xu · 12 years ago
  25. 61bfb93 add computeSimilarity and mergeAverageCoverage to MergeBubbleVertex by Anbang Xu · 12 years ago
  26. 6ee7bdf fix HashSet in SplitRepeat by Anbang Xu · 12 years ago
  27. 9db1ea8 merge MapReduceVertex to p2 and p2 is completed by Anbang Xu · 12 years ago
  28. 29ebdc8 Map/Reduce version in pregel is completed by Anbang Xu · 12 years ago
  29. 1307443 P2 pass test1,2,3,4 by Anbang Xu · 12 years ago
  30. a5e97c7 p4 pass test by Anbang Xu · 12 years ago
  31. 4416d3c debugging p4 by Anbang Xu · 12 years ago
  32. c71a2d3 removeBridge pass tests by Anbang Xu · 12 years ago Alpha Alpha-Graph-v2.0
  33. b1ccba9 p4 pass test by Anbang Xu · 12 years ago
  34. b3c4a2b removeTip pass all the tests by Anbang Xu · 12 years ago
  35. f947fb8 add test suite case for removetip/removebridge/pathmerge by Anbang Xu · 12 years ago
  36. e6d7e7a code review with Jake by AnbangX · 12 years ago
  37. 7984e2b p3 path merge pass test by AnbangX · 12 years ago
  38. 46fc86e add test cases for removeBridge, removeTip and mergeBubble by AnbangX · 12 years ago
  39. cc77cf7 add test cases for path merge and other data clean patterns by AnbangX · 12 years ago
  40. f60ef35 add test for graph build by AnbangX · 12 years ago
  41. 4b84334 format the code by AnbangX · 12 years ago
  42. eae1289 add testcase by AnbangX · 12 years ago
  43. 950d05e add more testcase by AnbangX · 12 years ago
  44. 02b2df5 add testcase by AnbangX · 12 years ago
  45. f11a472 add two step of log algorithm version by AnbangX · 12 years ago
  46. 70812cd fix some bugs of log algorithm and prepare to verify the correctness in big data by AnbangX · 12 years ago
  47. c07e482 delete unuse function by anbangx · 12 years ago
  48. f5ff29d change folder name to edu.uci.ics.genomix.pregelix by anbangx · 12 years ago
  49. aa919f9 add topology.xml by anbangx · 12 years ago
  50. dd49ed0 delete old file by anbangx · 12 years ago
  51. b82f054 Update by anbangx · 12 years ago
  52. 648cedf Update LogAlgorithm for merging graph by anbangx · 12 years ago
  53. f61ba4c Update genomix-pregelix by anbangx · 12 years ago