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asterix-gerrit.ics.uci.edu / hyracks / 15d0a8ffc9576041452bb41d467fa91aac38db2d
  1. 15d0a8f Add sequences for simple test cases by Jake Biesinger · 12 years ago
  2. 8e4fbc3 test cases and fixes for H4 by Jake Biesinger · 12 years ago
  3. 1dea1ea PathNodeInitial uses 2 output bins instead of 3 by Jake Biesinger · 12 years ago
  4. d31a1b4 use local maximum (not min) for h4 by Jake Biesinger · 12 years ago
  5. 98dae20 H4 complete; fix probBeingHead by Jake Biesinger · 12 years ago
  6. 21ad290 Code review with Jake on H4 by AnbangX · 12 years ago
  7. b5e81d6 Merge branch 'anbangx/fullstack_genomix' into genomix/fullstack_genomix by AnbangX · 12 years ago
  8. e6d7e7a code review with Jake by AnbangX · 12 years ago
  9. 26d9f46 Fix nodewritable merge logic by Jake Biesinger · 12 years ago
  10. af826b9 gc optimize h4 reduce by Jake Biesinger · 12 years ago
  11. 64ae953 Add mergeInDir for kmers by Jake Biesinger · 12 years ago
  12. 3819c94 add stop condition for p2 by AnbangX · 12 years ago
  13. 74c645c send msg to bidirection in p2 by AnbangX · 12 years ago
  14. e1dbea7 add subclass BasicVertex and fixing p2 by AnbangX · 12 years ago
  15. d2e7e86 fix path merge flaws by AnbangX · 12 years ago genomix/one_direction v2.0
  16. 8f57673 Merge branch 'anbangx/fullstack_genomix' of https://code.google.com/p/hyracks into anbangx/fullstack_genomix by AnbangX · 12 years ago
  17. 2a9137c finish p4 by AnbangX · 12 years ago
  18. b7b66eb correct p4 by AnbangX · 12 years ago
  19. 730ed8a some updates by AnbangX · 12 years ago
  20. 342d65b add p4 for path merge by AnbangX · 12 years ago
  21. 7984e2b p3 path merge pass test by AnbangX · 12 years ago
  22. 46fc86e add test cases for removeBridge, removeTip and mergeBubble by AnbangX · 12 years ago
  23. db5d564 WIP H4 1 mapper + 2 reducers by Jake Biesinger · 12 years ago
  24. 974c47f refactor h4 update mapper to use update messages by Jake Biesinger · 12 years ago
  25. 5adaeec add merge and update utility functions by Jake Biesinger · 12 years ago
  26. 605a5e8 finish p4 by AnbangX · 12 years ago
  27. 3cda435 Remove tests using MRUnit (whose old API doesn't work with MultipleOutputs) by Jake Biesinger · 12 years ago
  28. 71ea5d2 Fix RFMerge and add tests by Jake Biesinger · 12 years ago
  29. fd9b4b1 correct p4 by AnbangX · 12 years ago
  30. 0d0e1fe some updates by AnbangX · 12 years ago
  31. 01ad7c2 Merge and fix FRMerge. RF still doesn't work. by Jake Biesinger · 12 years ago
  32. 244a3a8 Merge branch 'genomix/fullstack_genomix' into wbiesing/genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  33. ce47851 add p4 for path merge by AnbangX · 12 years ago
  34. ab171ba refactor kmer mergeNext and mergePre -> mergeFF etc. untested :) by Jake Biesinger · 12 years ago
  35. 1f0b7d5 refactor MergePaths message types to use directions and message types by Jake Biesinger · 12 years ago
  36. a7216ac Add helper functions for mutating PositionListWritable's by Jake Biesinger · 12 years ago
  37. 3e70ffe PathNodeInitial updateable optimization by Jake Biesinger · 12 years ago
  38. 24e076f PathNodeInitial identifies nodes needing updates by Jake Biesinger · 12 years ago
  39. 0c08e56 p3 path merge pass test by AnbangX · 12 years ago
  40. 1920264 refactor: MessageFlag is now MergeMessageFlag by Jake Biesinger · 12 years ago
  41. 7c1d870 H4 driver works with multipleOutputs by Jake Biesinger · 12 years ago
  42. f20a7e7 Fix path separators in test cases by Jake Biesinger · 12 years ago
  43. b0e4fbc add test cases for removeBridge, removeTip and mergeBubble by AnbangX · 12 years ago
  44. 76cc619 simplify graphbuilding driver by Jake Biesinger · 12 years ago
  45. 86e8c3a simplify driver and test case for h4 graph building by Jake Biesinger · 12 years ago
  46. 87a1029 mergepaths uses multipleoutputs properly (prep for update code) by Jake Biesinger · 12 years ago
  47. c0e90ce simplify hadoop graphbuilding test case by Jake Biesinger · 12 years ago
  48. cc77cf7 add test cases for path merge and other data clean patterns by AnbangX · 12 years ago
  49. 2c41eb3 add remove in PositionListWritable and test by AnbangX · 12 years ago
  50. f60ef35 add test for graph build by AnbangX · 12 years ago
  51. 1e43ac4 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into jianfeng/genomix by Jianfeng Jia · 12 years ago
  52. acde177 add unmerged option in hyracks graph building by Jianfeng Jia · 12 years ago
  53. ec499a1 remove tips initial by Jake Biesinger · 12 years ago
  54. 82b237b Better testing for initial path merge by Jake Biesinger · 12 years ago
  55. 09cf1d1 facilitate better testing via more constructors and proper hashing/equals by Jake Biesinger · 12 years ago
  56. 90752e7 non-path nodes are pushed to "complete" output by Jake Biesinger · 12 years ago
  57. f608024 Merge branch 'anbangx/fullstack_genomix' of https://code.google.com/p/hyracks into anbangx/fullstack_genomix by AnbangX · 12 years ago
  58. 0d3ec57 update data clean 2013-06-06 by AnbangX · 12 years ago
  59. fd8c69a update 2013-6-4 by Anbang Xu · 12 years ago
  60. 0ae1c4c add data clean by AnbangX · 12 years ago
  61. 3a52d79 update data clean 2013-06-06 by AnbangX · 12 years ago
  62. 57971b6 path node works for complex starts by Jake Biesinger · 12 years ago
  63. bc7e15f Merge branch 'genomix/fullstack_genomix' into jianfeng/genomix by Jianfeng Jia · 12 years ago
  64. 0e69045 change iterator to for loop to save time. by Jianfeng Jia · 12 years ago
  65. e0fa424 Update H4 to new graph style by Jake Biesinger · 12 years ago
  66. 5932b3b fix test case paths by Jake Biesinger · 12 years ago
  67. bf8f525 Fix spelling by Jake Biesinger · 12 years ago
  68. 658d9f2 update 2013-6-4 by Anbang Xu · 12 years ago
  69. f367fd5 add data clean by AnbangX · 12 years ago
  70. c49f7b9 add warning of huge overlap by Jianfeng Jia · 12 years ago
  71. 471f75c remove the "new" block. by Jianfeng Jia · 12 years ago
  72. 9ac3f6c reformat by Jake Biesinger · 12 years ago
  73. 03364d3 restore strangely deleted MergePaths code by Jake Biesinger · 12 years ago
  74. d91b4fb Fix H3 test case by Jake Biesinger · 12 years ago
  75. 5215ff5 Updated base class for tests allows mutliple Test cases by Jake Biesinger · 12 years ago
  76. 79da38a clean code by Nan Zhang · 12 years ago
  77. 5d3d527 delete he pcommon by Nan Zhang · 12 years ago
  78. 37cc20b hadoop graph building completion by Nan Zhang · 12 years ago
  79. e66c773 build graph by Nan Zhang · 12 years ago
  80. eb8d72a Merge commit '951870ef4642f2003c4240eeef702fc90600fe77' into nanzhang/genomix by Nan Zhang · 12 years ago
  81. 3a26a3a merge with jianfeng-reverse by Nan Zhang · 12 years ago
  82. 951870e Merge branch 'anbangx/fullstack_bidirection' of https://code.google.com/p/hyracks into anbangx/fullstack_bidirection by AnbangX · 12 years ago
  83. 631482f add first small test case by AnbangX · 12 years ago
  84. 30f28d0 new code for bi-direction graph build by AnbangX · 12 years ago
  85. b3de32e add first small test case by AnbangX · 12 years ago
  86. 3931ef7 Broke test cases into base class plus small tests by Jake Biesinger · 12 years ago
  87. a591f26 clean up code and add copyright header by JavierJia · 12 years ago
  88. bbc4c23 Merge branch 'anbangx/fullstack_bidirection' of https://code.google.com/p/hyracks into anbangx/fullstack_bidirection by AnbangX · 12 years ago
  89. 297ea47 new code for bi-direction graph build by AnbangX · 12 years ago
  90. cf718fb new code for bi-direction graph build by AnbangX · 12 years ago
  91. bf9401e increase default frameSize to 128K by Jianfeng Jia · 12 years ago
  92. 8040709 add log to watch the tuple size by Jianfeng Jia · 12 years ago
  93. 12b4280 Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  94. 5ba19e2 add more information for larger data debug by Jianfeng Jia · 12 years ago genomix/unidirection
  95. 8a50889 fix outputKmerFactory racing problem by Jianfeng Jia · 12 years ago
  96. 33dc862 fix debugNc script by JavierJia · 12 years ago
  97. dba2ebf Merge branch 'jianfeng/genomix' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  98. 22616cf fixed the racing problem by Jianfeng Jia · 12 years ago
  99. e7b1730 Merge branch 'genomix/fullstack_bidirection' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
  100. edb2170 Merge branch 'wbiesing/genomix/h3' into jianfeng/genomix-reverse by Jake Biesinger · 12 years ago