1. 9908512 Refactor tipremove by Anbang Xu · 12 years ago
  2. 53cc7e3 Merge branch 'wbiesing/debug' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  3. 4273653 add ThreeNodesCycle, and it succeeds to pass test by Anbang Xu · 12 years ago
  4. de16f37 add AlreadyInEdge test case by Jake Biesinger · 12 years ago
  5. 03ba0f7 Add simple RF FR RF test case by Jake Biesinger · 12 years ago
  6. 14fb2b9 add random test et by Anbang Xu · 12 years ago
  7. df811e5 add SymmetryChecker by Anbang Xu · 12 years ago
  8. 6c79239 add AAA testcase by Anbang Xu · 12 years ago
  9. cc1135b change addEdge to unionEdge in update by Anbang Xu · 12 years ago
  10. 4b21369 Fix TandemRepeatAndCycle bug by Anbang Xu · 12 years ago
  11. 3e91447 add test case for tandem repeats with multiple self-edges by Jake Biesinger · 12 years ago
  12. 5ecb66f seperate MessageFlag and State by Anbang Xu · 12 years ago
  13. 6485489 Final Vertex Has correct edgelist by Anbang Xu · 12 years ago
  14. 4da15b2 add many similar bubbles in one pattern test case and BubbleMerge pass test by Anbang Xu · 12 years ago
  15. 1aed014 add statistics counters to removeTip, pathMerge, removeBridge by Anbang Xu · 12 years ago
  16. 8c187a6 add RandonWalk test case by Anbang Xu · 12 years ago
  17. 88e9442 RemoveTip pass test by Anbang Xu · 12 years ago
  18. e71a964 Unroll Repeat pass test by Anbang Xu · 12 years ago
  19. 39cfc58 add synthetic test case by Jake Biesinger · 12 years ago
  20. c2aa582 Merge branch 'anbangx/backupMergingWithMaster' into genomix/fullstack_genomix by Jake Biesinger · 12 years ago
  21. 1e03787 Merge branch 'anbangx/backupMergingWithMaster_errorcase' into wbiesing/merge_fs_backup by Jake Biesinger · 12 years ago
  22. b19ba95 BubbleMerge pass complicated test cases by Anbang Xu · 12 years ago
  23. fc4fe25 add failing pathmerge testcase by Jake Biesinger · 12 years ago
  24. 32a956b fix one bug in path merge by Anbang Xu · 12 years ago
  25. 630586c add test case for synthetic data by Jake Biesinger · 12 years ago
  26. 96eab83 Merge branch 'anbangx/backupMergingWithMaster' into wbiesing/driver_backup_merge by Jake Biesinger · 12 years ago
  27. 26e7332 BubbleMerge test is almost finished except grid test case by Anbang Xu · 12 years ago
  28. c0b37b1 change bubble's pre-condition -- pathNode to anyNode by Anbang Xu · 12 years ago
  29. e763a06 add complicated test case for BubbleMerge by Anbang Xu · 12 years ago
  30. 6ddc6cc testing BubbleMerge by Anbang Xu · 12 years ago
  31. 3aba0f0 SplitRepeat test is completed by Anbang Xu · 12 years ago
  32. 41ffd05 Merge with main branch by Anbang Xu · 12 years ago
  33. 4a9e45c Add testcases for SplitRepeat by Anbang Xu · 12 years ago
  34. d688b5a Add skip tandem repeat to pathmerge. TODO: detect cycle in pathmerge by Anbang Xu · 12 years ago
  35. 87b679f Merge branch 'anbangx/fullstack_genomix' into wbiesing/driver by Jake Biesinger · 12 years ago
  36. 2f3e3bb PathMerge pass test except TandemRepeat. TODO: skip TandemRepeat in pathmerge by Anbang Xu · 12 years ago
  37. 03434ff add hyracks-built graph as a pregelix test case by Jake Biesinger · 12 years ago
  38. 569945a add RF/FR with/without head test for pathmerge by Anbang Xu · 12 years ago
  39. 9ac0dda Modify mergeWithKmer to mergeWithNode by Anbang Xu · 12 years ago
  40. d06c50f add testcase for pathmerge by Anbang Xu · 12 years ago
  41. ca15771 UnrollTandemRepeat is completed by Anbang Xu · 12 years ago
  42. b37b705 Add UnRollTandemRepeat. TODO: add the corresponding MSG and update edges by Anbang Xu · 12 years ago
  43. 5e01f76 Adapt RemoveLowCoverageVertex to new graph structure. Finally, all the patterns are adapted to new graph by Anbang Xu · 12 years ago
  44. e7856d5 Adapt ScaffoldingVertex to new graph structure by Anbang Xu · 12 years ago
  45. 6212780 BTS almost done and wait for EdgeListWritable[dir].getReadIds(Key key) by Anbang Xu · 12 years ago
  46. 0217e7e Adapt SplitRepeatVertex to new graph structure. TODO: test AdjSplitRepeat by Anbang Xu · 12 years ago
  47. 37a8489 Adapt MergeBubbleVertex to new graph structure. TODO: check if bubble flip and merge all metadata except kmer by Anbang Xu · 12 years ago
  48. 977a413 Adapt BridgeAddVertex and BridgeRemoveVertex to new graph structure by Anbang Xu · 12 years ago
  49. 4370b2b adapt TipAddVertex and TipRemoveVertex to new graph structure by Anbang Xu · 12 years ago
  50. 112cdf7 Adapt MapReduceVertex and P4 to new graph structure by Anbang Xu · 12 years ago
  51. e7885ee Pregel TestSuite is completed by Anbang Xu · 12 years ago