Log - 05fc10da52783a3dda5d7baf3866bcfd66ef8ca1 - hyracks

be39f91 Add AverageCoverage to graph construction(hadoop) and make graphviz more pretty by Anbang Xu · 12 years ago
ac6b1a6 RemoveBridge pass test and add RemoveLowCoverage and Scaffolding by Anbang Xu · 12 years ago
4a5ee49 Hadoop TestSuite is completed and P2 pass test by Anbang Xu · 12 years ago
18c032a make TestSuite for graph building(hadoop) by Anbang Xu · 12 years ago
19b758e ervoer testUtils by Nan Zhang · 12 years ago
931fcc8 clean genomixMiniCluster by Nan Zhang · 12 years ago
3e3144b cleanning continue by Nan Zhang · 12 years ago
7dc9400 clean the useless code for project by Nan Zhang · 12 years ago
6981f1c adapt graph construction(hadoop) to VKmer by Anbang Xu · 12 years ago
95c432c BridgeAddVertex pass test by Anbang Xu · 12 years ago
aac7732 SimpleSplitRepeat is completed. An issue in graph building(hadoop): KmerList.appendList() doesn't check existed element by Anbang Xu · 12 years ago
0049eac refactor 'NaiveAlgorithm' to 'P1' and add test case for SplitRepeat by Anbang Xu · 12 years ago
a5e97c7 p4 pass test by Anbang Xu · 12 years ago
4416d3c debugging p4 by Anbang Xu · 12 years ago
84e385f Try to add globe kmerSize but fail in testing by Anbang Xu · 12 years ago
bcf5a70 add hadoop test and keep both bin and txt by Anbang Xu · 12 years ago
f7a23e4 add Reducer and change PositionWritable to PositionListWritable in NodeWritable by Anbang Xu · 12 years ago
0c644f4 Mapper passes test by Anbang Xu · 12 years ago
3335bb6 hadoop for contrail graph by Anbang Xu · 12 years ago
8dbe728 refactor 'size' to 'kmerByteSize' in KmerBytesWritable by Anbang Xu · 12 years ago
6b45971 Fix H4, test templates by Jake Biesinger · 12 years ago
76b3277 Merge branch 'genomix/fullstack_genomix' of https://code.google.com/p/hyracks into genomix/fullstack_genomix by Anbang Xu · 12 years ago
f947fb8 add test suite case for removetip/removebridge/pathmerge by Anbang Xu · 12 years ago
8f719e0 Use BuildAllGraphs by Jake Biesinger · 12 years ago
d8f5c89 Formulate test code by Anbang Xu · 12 years ago
48c0cec q by Jake Biesinger · 12 years ago
b679646 Add more test cases for path merge by Jake Biesinger · 12 years ago
67e67aa more test cases by Jake Biesinger · 12 years ago
8c8f194 test cases by Jake Biesinger · 12 years ago
8e4fbc3 test cases and fixes for H4 by Jake Biesinger · 12 years ago
3cda435 Remove tests using MRUnit (whose old API doesn't work with MultipleOutputs) by Jake Biesinger · 12 years ago
1f0b7d5 refactor MergePaths message types to use directions and message types by Jake Biesinger · 12 years ago
1920264 refactor: MessageFlag is now MergeMessageFlag by Jake Biesinger · 12 years ago
7c1d870 H4 driver works with multipleOutputs by Jake Biesinger · 12 years ago
86e8c3a simplify driver and test case for h4 graph building by Jake Biesinger · 12 years ago
c0e90ce simplify hadoop graphbuilding test case by Jake Biesinger · 12 years ago
82b237b Better testing for initial path merge by Jake Biesinger · 12 years ago
e0fa424 Update H4 to new graph style by Jake Biesinger · 12 years ago
5932b3b fix test case paths by Jake Biesinger · 12 years ago
9ac3f6c reformat by Jake Biesinger · 12 years ago
d91b4fb Fix H3 test case by Jake Biesinger · 12 years ago
5215ff5 Updated base class for tests allows mutliple Test cases by Jake Biesinger · 12 years ago
79da38a clean code by Nan Zhang · 12 years ago
5d3d527 delete he pcommon by Nan Zhang · 12 years ago
37cc20b hadoop graph building completion by Nan Zhang · 12 years ago
3931ef7 Broke test cases into base class plus small tests by Jake Biesinger · 12 years ago
e7b1730 Merge branch 'genomix/fullstack_bidirection' into jianfeng/genomix-reverse by Jianfeng Jia · 12 years ago
f8261bc Add a unit test for H3 which builds the graph by Jake Biesinger · 12 years ago
c2a055b new graph building progress by Nan Zhang · 12 years ago
1181e3c modify the driver of velvet_graphbuilding by Nan Zhang · 12 years ago
c49ce70 add package to build old package success by Nan Zhang · 12 years ago
006ff46 new package for path merge by Nan Zhang · 12 years ago
b1ee50c merge path update by Nan Zhang · 12 years ago
0047d3c after code view h1 h2 update by Nan Zhang · 12 years ago
c9d802a Remove mac .DS_Store files and ignore them in the future. by Jake Biesinger · 12 years ago
dbc32ae adjust h1 code by hadoop · 12 years ago
42a210a change new name for hadoop program by hadoop · 12 years ago
dfd15e1 change the test name by hadoop · 12 years ago
a3a8958 new h2 modified by hadoop · 12 years ago
5f3fce8 deleted all actual file by hadoop · 12 years ago
c07f6bf new h2 by hadoop · 12 years ago
8824dde Merge branch 'fullstack_genomix' of https://code.google.com/p/hyracks into fullstack_genomix by hadoop · 12 years ago
3c3f2b7 Change return value of shiftKmer from bitmap to genecode by JavierJia · 12 years ago
00f6336 h2h2 by hadoop · 12 years ago
99f0202 Please enter the commit message for your changes. Lines starting by hadoop · 12 years ago
4163db2 h1 changes by hadoop · 12 years ago
0c37dd0 make genomix-hadoop genomix-hyracks compilable by JavierJia · 12 years ago
8a89876 hadoop pathmerge h1 algorithm by zhangnan2920214@gmail.com · 12 years ago
c410249 hadoop pathmerge h1 algorithm by zhangnan2920214@gmail.com · 12 years ago
96f2a1f merge with genomix-data by zhangnan2920214@gmail.com · 12 years ago
6be6225 the cluster version by zhangnan2920214@gmail.com · 12 years ago
e2cb8f6 add valuewritable by zhangnan2920214@gmail.com · 12 years ago
cf793ad sequential file format by zhangnan2920214@gmail.com · 12 years ago
f149d8f create svn dir by zhangnan2920214@gmail.com · 12 years ago
c213252 add the byteswritable by zhangnan2920214@gmail.com · 12 years ago
60590b6 create svn dir by zhangnan2920214@gmail.com · 13 years ago
66a0093 create svn dir by zhangnan2920214@gmail.com · 13 years ago
8ed1c1f reconstruct the code directory by jianfeng.jia@gmail.com · 13 years ago