| commit | f5eb8b70c0f096ba881b0db77648514095d0100e | [log] [tgz] |
|---|---|---|
| author | anbangx <anbangx@123451ca-8445-de46-9d55-352943316053> | Mon Apr 01 16:16:31 2013 +0000 |
| committer | anbangx <anbangx@123451ca-8445-de46-9d55-352943316053> | Mon Apr 01 16:16:31 2013 +0000 |
| tree | 18e750c5d0378c179cb898a5b566c281e2f97930 | |
| parent | f1bf6d56f1befd67e1abfb1a95fc9d7dbd8ac63f [diff] |
some modified git-svn-id: https://hyracks.googlecode.com/svn/branches/fullstack_genomix@3292 123451ca-8445-de46-9d55-352943316053
diff --git a/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/GraphVertexOperation.java b/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/GraphVertexOperation.java index 37f348c..8fa34c3 100644 --- a/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/GraphVertexOperation.java +++ b/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/GraphVertexOperation.java
@@ -24,7 +24,7 @@ import edu.uci.ics.pregelix.type.KmerCountValue; public class GraphVertexOperation { - public static final int k = 15; //kmer, k: the length of kmer + public static final int k = 55; //kmer, k: the length of kmer static private final Path TMP_DIR = new Path( GenerateSequenceFile.class.getSimpleName() + "_INTERIM"); /**
diff --git a/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/TestLoadGraphVertex.java b/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/TestLoadGraphVertex.java index 5ccaae5..30e6b9a 100644 --- a/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/TestLoadGraphVertex.java +++ b/genomix/genomix-pregelix/src/main/java/edu/uci/ics/pregelix/TestLoadGraphVertex.java
@@ -94,6 +94,7 @@ * @param args */ public static void main(String[] args) throws Exception { + //final int k = Integer.parseInt(args[0]); PregelixJob job = new PregelixJob(MergeGraphVertex.class.getSimpleName()); job.setVertexClass(TestLoadGraphVertex.class); /**