fix normalized comparator
git-svn-id: https://hyracks.googlecode.com/svn/branches/fullstack_genomix@3135 123451ca-8445-de46-9d55-352943316053
diff --git a/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/example/jobrun/JobRunTest.java b/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/example/jobrun/JobRunTest.java
index 3e80ab7..4eb7b9f 100644
--- a/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/example/jobrun/JobRunTest.java
+++ b/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/example/jobrun/JobRunTest.java
@@ -145,7 +145,7 @@
public void TestHybridGroupby() throws Exception {
conf.set(GenomixJob.GROUPBY_TYPE, "hybrid");
- conf.set(GenomixJob.OUTPUT_FORMAT, "binary");
+ conf.set(GenomixJob.OUTPUT_FORMAT, "text");
System.err.println("Testing HybridGroupBy");
driver.runJob(new GenomixJob(conf), Plan.BUILD_DEBRUJIN_GRAPH, true);
Assert.assertEquals(true, checkResults());
diff --git a/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt b/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
index f63a141..f5a05a8 100755
--- a/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
+++ b/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
@@ -1,4 +1,8 @@
@625E1AAXX100810:1:100:10000:10271/1
AATAGAAG
+AATAGAAG
+
EDBDB?BEEEDGGEGGGDGGGA>DG@GGD;GD@DG@F?<B<BFFD?
+AATAGAAG
+AATAGAAG
+AATAGAAG
diff --git a/genomix/genomix-hyracks/src/test/resources/expected/result2 b/genomix/genomix-hyracks/src/test/resources/expected/result2
index 5e76458..9296453 100755
--- a/genomix/genomix-hyracks/src/test/resources/expected/result2
+++ b/genomix/genomix-hyracks/src/test/resources/expected/result2
@@ -1,4 +1,4 @@
-AATAG |A 1
-AGAAG T| 1
-ATAGA A|A 1
-TAGAA A|G 1
+AATAG |A 5
+AGAAG T| 5
+ATAGA A|A 5
+TAGAA A|G 5