diff --git a/genomix/genomix-hadoop/src/test/java/edu/uci/ics/genomix/hadoop/graphclean/mergepaths/h3/TestPathMergeH3.java b/genomix/genomix-hadoop/src/test/java/edu/uci/ics/genomix/hadoop/graphclean/mergepaths/h3/TestPathMergeH3.java
index c721ee8..7db3db5 100644
--- a/genomix/genomix-hadoop/src/test/java/edu/uci/ics/genomix/hadoop/graphclean/mergepaths/h3/TestPathMergeH3.java
+++ b/genomix/genomix-hadoop/src/test/java/edu/uci/ics/genomix/hadoop/graphclean/mergepaths/h3/TestPathMergeH3.java
@@ -36,6 +36,11 @@
     }
 
     @Test
+    public void BuildAllGraphs() throws Exception {
+        for (String path : )
+    }
+    
+//    @Test
     public void TestBuildGraph() throws Exception {
     	LOCAL_SEQUENCE_FILE = "src/test/resources/data/sequence/bubble_test1.txt";
     	GRAPHBUILD_FILE = "bubble_test1.txt";
diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt
deleted file mode 100644
index 2896107..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt
+++ /dev/null
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt.binmerge b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt.binmerge
deleted file mode 100755
index 94e3e4f..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/bubble_test1.txt.binmerge
+++ /dev/null
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deleted file mode 100644
index faa0fa6..0000000
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deleted file mode 100644
index 8b0bfdc..0000000
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+++ /dev/null
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deleted file mode 100755
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deleted file mode 100644
index 14cf2e1..0000000
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt
deleted file mode 100644
index bdeb586..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt
+++ /dev/null
@@ -1,147 +0,0 @@
-((2,1)	[(2,2)]	[]	[]	[]	CCTCG)	(null)
-((2,2)	[(2,3)]	[(1,4)]	[]	[(2,1)]	CTCGC)	(null)
-((2,3)	[(2,4)]	[]	[]	[(2,2)]	TCGCA)	(null)
-((2,4)	[]	[(1,2)]	[]	[(2,3)]	CGCAC)	(null)
-((4,1)	[(4,2)]	[]	[]	[]	GAGGG)	(null)
-((4,2)	[(4,3)]	[(5,4)]	[]	[(4,1)]	AGGGT)	(null)
-((4,3)	[(4,4)]	[]	[]	[(3,4),(4,2)]	GGGTT)	(null)
-((4,4)	[]	[(5,2)]	[]	[(4,3)]	GGTTG)	(null)
-((6,1)	[(6,2)]	[]	[(5,3)]	[]	GTTGC)	(null)
-((6,2)	[(6,3)]	[(7,4)]	[]	[(6,1)]	TTGCT)	(null)
-((6,3)	[(6,4)]	[]	[(5,1)]	[(6,2)]	TGCTG)	(null)
-((6,4)	[]	[(7,2)]	[]	[(6,3)]	GCTGA)	(null)
-((8,1)	[(24,1),(8,2)]	[]	[(7,3)]	[]	CTGAA)	(null)
-((8,2)	[(8,3)]	[(9,4)]	[]	[(8,1)]	TGAAA)	(null)
-((8,3)	[(8,4)]	[]	[(7,1)]	[(19,4),(8,2)]	GAAAT)	(null)
-((8,4)	[]	[(9,2)]	[]	[(8,3)]	AAATC)	(null)
-((10,1)	[(10,2)]	[]	[]	[(11,2)]	GGCAG)	(null)
-((10,2)	[(9,1),(10,3)]	[]	[]	[(10,1)]	GCAGA)	(null)
-((10,3)	[(10,4)]	[]	[]	[(11,4),(10,2)]	CAGAT)	(null)
-((10,4)	[(9,3)]	[]	[]	[(10,3)]	AGATT)	(null)
-((12,1)	[(12,2)]	[]	[]	[(13,2)]	CTCTG)	(null)
-((12,2)	[(11,1),(12,3)]	[]	[]	[(12,1)]	TCTGG)	(null)
-((12,3)	[(12,4)]	[]	[]	[(13,4),(12,2)]	CTGGC)	(null)
-((12,4)	[(11,3)]	[]	[]	[(12,3)]	TGGCA)	(null)
-((14,1)	[(14,2)]	[]	[]	[(15,2)]	GCATC)	(null)
-((14,2)	[(13,1),(14,3)]	[]	[]	[(14,1)]	CATCT)	(null)
-((14,3)	[(14,4)]	[]	[]	[(15,4),(14,2)]	ATCTC)	(null)
-((14,4)	[(13,3)]	[]	[]	[(14,3)]	TCTCT)	(null)
-((16,1)	[(16,2)]	[]	[]	[(17,2)]	AACGG)	(null)
-((16,2)	[(15,1),(16,3)]	[]	[]	[(16,1)]	ACGGC)	(null)
-((16,3)	[(16,4)]	[]	[]	[(17,4),(16,2)]	CGGCA)	(null)
-((16,4)	[(15,3)]	[]	[]	[(16,3)]	GGCAT)	(null)
-((18,1)	[(23,1),(18,2)]	[]	[(17,3)]	[]	CGTTT)	(null)
-((18,2)	[(7,1),(18,3)]	[(19,4)]	[]	[(18,1)]	GTTTC)	(null)
-((18,3)	[(18,4)]	[]	[(17,1)]	[(18,2)]	TTTCA)	(null)
-((18,4)	[]	[(19,2)]	[(24,1)]	[(18,3)]	TTCAA)	(null)
-((20,1)	[(20,2)]	[]	[(19,3)]	[]	TCAAT)	(null)
-((20,2)	[(21,1),(20,3)]	[]	[]	[(20,1)]	CAATA)	(null)
-((20,3)	[(20,4)]	[]	[(19,1)]	[(20,2)]	AATAC)	(null)
-((20,4)	[(21,3)]	[]	[]	[(20,3)]	ATACG)	(null)
-((22,1)	[(22,2)]	[]	[]	[(28,1),(27,3),(21,2)]	TACGT)	(null)
-((22,2)	[(22,3)]	[(23,4)]	[]	[(27,4),(22,1)]	ACGTG)	(null)
-((22,3)	[(22,4)]	[]	[]	[(21,4),(22,2)]	CGTGA)	(null)
-((22,4)	[]	[(23,2)]	[]	[(22,3)]	GTGAA)	(null)
-((24,1)	[(17,1),(24,2)]	[]	[(23,3),(18,4),(7,2)]	[(8,1),(19,3)]	TGAAA)	(null)
-((24,2)	[(25,1),(24,3)]	[]	[(7,1)]	[(19,4),(24,1)]	GAAAC)	(null)
-((24,3)	[(24,4)]	[]	[(23,1)]	[(24,2)]	AAACT)	(null)
-((24,4)	[(25,3)]	[]	[]	[(24,3)]	AACTA)	(null)
-((26,1)	[(26,2)]	[]	[(27,3)]	[]	GTAAT)	(null)
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-((26,3)	[(26,4)]	[]	[(27,1)]	[(26,2)]	AATAG)	(null)
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-((28,1)	[(22,1),(28,2)]	[]	[]	[(27,2)]	TTACG)	(null)
-((28,2)	[(28,3)]	[(29,4)]	[]	[(28,1)]	TACGT)	(null)
-((28,3)	[(28,4)]	[]	[]	[(27,4),(28,2)]	ACGTC)	(null)
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-((30,1)	[(30,2)]	[]	[(29,3)]	[(31,2)]	GTCAT)	(null)
-((30,2)	[(29,1),(30,3)]	[(31,4)]	[]	[(30,1)]	TCATG)	(null)
-((30,3)	[(30,4)]	[]	[(29,1)]	[(31,4),(30,2)]	CATGA)	(null)
-((30,4)	[(29,3)]	[(31,2)]	[]	[(30,3)]	ATGAC)	(null)
-((32,1)	[(32,2)]	[]	[(33,3),(35,3)]	[]	AAGCG)	(null)
-((32,2)	[(31,1),(32,3)]	[]	[]	[(32,1)]	AGCGT)	(null)
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-((32,4)	[(31,3)]	[(29,2)]	[]	[(32,3)]	CGTCA)	(null)
-((34,1)	[(34,2)]	[]	[]	[(33,2),(35,2)]	GCTTA)	(null)
-((34,2)	[(34,3)]	[(35,4),(33,4)]	[]	[(34,1)]	CTTAA)	(null)
-((34,3)	[(34,4)]	[]	[]	[(35,4),(33,4),(34,2)]	TTAAG)	(null)
-((34,4)	[]	[(33,2),(35,2)]	[]	[(34,3)]	TAAGC)	(null)
-((36,1)	[(36,2)]	[]	[(33,3),(35,3)]	[]	AAGCG)	(null)
-((36,2)	[(36,3)]	[(37,4)]	[]	[(36,1)]	AGCGT)	(null)
-((36,3)	[(36,4)]	[]	[]	[(36,2)]	GCGTG)	(null)
-((36,4)	[]	[(37,2)]	[]	[(36,3)]	CGTGT)	(null)
-((1,1)	[(1,2)]	[]	[]	[]	TAGTG)	(null)
-((1,2)	[(1,3)]	[(2,4)]	[]	[(1,1)]	AGTGC)	(null)
-((1,3)	[(1,4)]	[]	[]	[(1,2)]	GTGCG)	(null)
-((1,4)	[]	[(2,2)]	[]	[(1,3)]	TGCGA)	(null)
-((3,1)	[(3,3)]	[]	[]	[]	GCTAGG)	(null)
-((3,3)	[(3,4)]	[]	[]	[(3,1)]	TAGGG)	(null)
-((3,4)	[(4,3)]	[]	[]	[(3,3)]	AGGGT)	(null)
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt.binmerge b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt.binmerge
deleted file mode 100755
index 8d6ed68..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt.binmerge
+++ /dev/null
Binary files differ
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deleted file mode 100644
index 655df86..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-merged/walk_random_seq1.txt.svg
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-<!-- 23,1 -->
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-<!-- 24,3&#45;&gt;23,1 -->
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-<!-- 24,4&#45;&gt;24,3 -->
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-<!-- 25,3 -->
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-<text text-anchor="start" x="871.5" y="-1152.67" font-family="Times Roman,serif" font-size="10.00">ATAGT</text>
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-<!-- 24,4&#45;&gt;25,3 -->
-<g id="edge308" class="edge"><title>24,4&#45;&gt;25,3</title>
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-<text text-anchor="start" x="738" y="-1152.67" font-family="Times Roman,serif" font-size="10.00">TAGTT</text>
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-<!-- 25,1&#45;&gt;25,2 -->
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-<!-- 25,2&#45;&gt;25,3 -->
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-<polygon fill="#218559" stroke="#218559" points="861,-2380 861,-2394 912,-2394 912,-2380 861,-2380"/>
-<text text-anchor="start" x="871.5" y="-2384.67" font-family="Times Roman,serif" font-size="10.00">ACTAT</text>
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-<!-- 25,2&#45;&gt;26,4 -->
-<g id="edge720" class="edge"><title>25,2&#45;&gt;26,4</title>
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-<!-- 25,3&#45;&gt;24,4 -->
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-<!-- 25,3&#45;&gt;25,4 -->
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-<!-- 25,4&#45;&gt;26,2 -->
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-<!-- 26,1&#45;&gt;26,2 -->
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-<!-- 26,1&#45;&gt;27,3 -->
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-<!-- 26,2&#45;&gt;26,3 -->
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-<!-- 26,3&#45;&gt;27,1 -->
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-<text text-anchor="start" x="602" y="-2722.67" font-family="Times Roman,serif" font-size="10.00">CGTAA</text>
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-<!-- 27,2&#45;&gt;28,1 -->
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-<!-- 27,3&#45;&gt;27,4 -->
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-<!-- 20,1&#45;&gt;20,2 -->
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-<!-- 20,2&#45;&gt;20,3 -->
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-<!-- 21,3&#45;&gt;21,2 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="828.864,-3645.82 838.933,-3642.52 829.007,-3638.82 828.864,-3645.82"/>
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-<polygon fill="#218559" stroke="#218559" points="808.937,-3652.18 798.867,-3655.47 808.792,-3659.18 808.937,-3652.18"/>
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-<!-- 22,3 -->
-<g id="node47" class="node"><title>22,3</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-3234" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-3245.17" font-family="Times Roman,serif" font-size="10.00">22,3&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="727,-3226 727,-3240 778,-3240 778,-3226 727,-3226"/>
-<text text-anchor="start" x="735.5" y="-3230.67" font-family="Times Roman,serif" font-size="10.00">CGTGA</text>
-<polygon fill="#218559" stroke="#218559" points="727,-3212 727,-3226 778,-3226 778,-3212 727,-3212"/>
-<text text-anchor="start" x="736" y="-3216.67" font-family="Times Roman,serif" font-size="10.00">TCACG</text>
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-<!-- 21,4&#45;&gt;22,3 -->
-<g id="edge678" class="edge"><title>21,4&#45;&gt;22,3</title>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="767.953,-3278.02 761.888,-3269.33 761.212,-3279.91 767.953,-3278.02"/>
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-<!-- 23,4 -->
-<g id="node53" class="node"><title>23,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-4725" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-4736.17" font-family="Times Roman,serif" font-size="10.00">23,4&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="727,-4717 727,-4731 778,-4731 778,-4717 727,-4717"/>
-<text text-anchor="start" x="736" y="-4721.67" font-family="Times Roman,serif" font-size="10.00">TCACG</text>
-<polygon fill="#218559" stroke="#218559" points="727,-4703 727,-4717 778,-4717 778,-4703 727,-4703"/>
-<text text-anchor="start" x="735.5" y="-4707.67" font-family="Times Roman,serif" font-size="10.00">CGTGA</text>
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-<!-- 22,2&#45;&gt;23,4 -->
-<g id="edge262" class="edge"><title>22,2&#45;&gt;23,4</title>
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-<!-- 22,3&#45;&gt;21,4 -->
-<g id="edge270" class="edge"><title>22,3&#45;&gt;21,4</title>
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-<g id="node48" class="node"><title>22,4</title>
-<ellipse fill="none" stroke="black" cx="886" cy="-3234" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="863.5" y="-3245.17" font-family="Times Roman,serif" font-size="10.00">22,4&#45;&#45;null</text>
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-<text text-anchor="start" x="871.5" y="-3216.67" font-family="Times Roman,serif" font-size="10.00">TTCAC</text>
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-<!-- 22,3&#45;&gt;22,4 -->
-<g id="edge268" class="edge"><title>22,3&#45;&gt;22,4</title>
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-<!-- 22,4&#45;&gt;23,2 -->
-<g id="edge274" class="edge"><title>22,4&#45;&gt;23,2</title>
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-<!-- 28,1&#45;&gt;27,2 -->
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-<!-- 28,1&#45;&gt;22,1 -->
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-<text text-anchor="start" x="736.5" y="-2722.67" font-family="Times Roman,serif" font-size="10.00">ACGTA</text>
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-<!-- 28,1&#45;&gt;28,2 -->
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-<!-- 29,4 -->
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-<!-- 28,2&#45;&gt;29,4 -->
-<g id="edge340" class="edge"><title>28,2&#45;&gt;29,4</title>
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-<!-- 28,4 -->
-<g id="node58" class="node"><title>28,4</title>
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-<!-- 28,3&#45;&gt;28,4 -->
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-<!-- 29,2 -->
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-<text text-anchor="start" x="870" y="-2302.67" font-family="Times Roman,serif" font-size="10.00">ATGAC</text>
-<polygon fill="#218559" stroke="#218559" points="861,-2284 861,-2298 912,-2298 912,-2284 861,-2284"/>
-<text text-anchor="start" x="871.5" y="-2288.67" font-family="Times Roman,serif" font-size="10.00">GTCAT</text>
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-<!-- 28,4&#45;&gt;29,2 -->
-<g id="edge352" class="edge"><title>28,4&#45;&gt;29,2</title>
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-<g id="edge350" class="edge"><title>28,4&#45;&gt;31,3</title>
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-<!-- 29,1&#45;&gt;29,2 -->
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-<!-- 29,1&#45;&gt;30,3 -->
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-<!-- 29,2&#45;&gt;29,3 -->
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-<text text-anchor="start" x="49" y="-5411.67" font-family="Times Roman,serif" font-size="10.00">TAGTG</text>
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-<!-- 1,2&#45;&gt;2,4 -->
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-<!-- 1,4&#45;&gt;1,3 -->
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-<text text-anchor="start" x="330.5" y="-5330.17" font-family="Times Roman,serif" font-size="10.00">2,2&#45;&#45;null</text>
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-<g id="edge466" class="edge"><title>1,4&#45;&gt;2,2</title>
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-<!-- 3,1&#45;&gt;3,3 -->
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-<polygon fill="#218559" stroke="#218559" points="864,-2476 864,-2490 909,-2490 909,-2476 864,-2476"/>
-<text text-anchor="start" x="870.5" y="-2480.67" font-family="Times Roman,serif" font-size="10.00">GTTGC</text>
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-<!-- 5,1&#45;&gt;5,2 -->
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-<text text-anchor="start" x="866.5" y="-3142.17" font-family="Times Roman,serif" font-size="10.00">6,3&#45;&#45;null</text>
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-<text text-anchor="start" x="870" y="-3127.67" font-family="Times Roman,serif" font-size="10.00">TGCTG</text>
-<polygon fill="#218559" stroke="#218559" points="864,-3109 864,-3123 909,-3123 909,-3109 864,-3109"/>
-<text text-anchor="start" x="869" y="-3113.67" font-family="Times Roman,serif" font-size="10.00">CAGCA</text>
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-<!-- 5,1&#45;&gt;6,3 -->
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-<text text-anchor="start" x="1000.5" y="-2509.17" font-family="Times Roman,serif" font-size="10.00">5,3&#45;&#45;null</text>
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-<polygon fill="#218559" stroke="#218559" points="998,-2476 998,-2490 1043,-2490 1043,-2476 998,-2476"/>
-<text text-anchor="start" x="1004" y="-2480.67" font-family="Times Roman,serif" font-size="10.00">GGTTG</text>
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-<!-- 5,2&#45;&gt;5,3 -->
-<g id="edge484" class="edge"><title>5,2&#45;&gt;5,3</title>
-<path fill="none" stroke="#dd1e2f" d="M928.398,-2491.67C940.741,-2491.23 954.377,-2491.14 967.273,-2491.39"/>
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-<g id="node87" class="node"><title>4,4</title>
-<ellipse fill="none" stroke="black" cx="1288" cy="-1444" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="1268.5" y="-1455.17" font-family="Times Roman,serif" font-size="10.00">4,4&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="1266,-1436 1266,-1450 1311,-1450 1311,-1436 1266,-1436"/>
-<text text-anchor="start" x="1272" y="-1440.67" font-family="Times Roman,serif" font-size="10.00">GGTTG</text>
-<polygon fill="#218559" stroke="#218559" points="1266,-1422 1266,-1436 1311,-1436 1311,-1422 1266,-1422"/>
-<text text-anchor="start" x="1271.5" y="-1426.67" font-family="Times Roman,serif" font-size="10.00">CAACC</text>
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-<!-- 5,2&#45;&gt;4,4 -->
-<g id="edge486" class="edge"><title>5,2&#45;&gt;4,4</title>
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-<!-- 5,3&#45;&gt;5,2 -->
-<g id="edge494" class="edge"><title>5,3&#45;&gt;5,2</title>
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-<polygon fill="#218559" stroke="#218559" points="938.491,-2501.11 928.398,-2504.33 938.298,-2508.1 938.491,-2501.11"/>
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-<text text-anchor="start" x="1134.5" y="-2509.17" font-family="Times Roman,serif" font-size="10.00">5,4&#45;&#45;null</text>
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-<text text-anchor="start" x="1137.5" y="-2494.67" font-family="Times Roman,serif" font-size="10.00">AACCC</text>
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-<text text-anchor="start" x="1138" y="-2480.67" font-family="Times Roman,serif" font-size="10.00">GGGTT</text>
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-<!-- 5,3&#45;&gt;5,4 -->
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-<g id="node94" class="node"><title>6,1</title>
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-<text text-anchor="start" x="598.5" y="-3142.17" font-family="Times Roman,serif" font-size="10.00">6,1&#45;&#45;null</text>
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-<text text-anchor="start" x="602.5" y="-3127.67" font-family="Times Roman,serif" font-size="10.00">GTTGC</text>
-<polygon fill="#218559" stroke="#218559" points="596,-3109 596,-3123 641,-3123 641,-3109 596,-3109"/>
-<text text-anchor="start" x="601" y="-3113.67" font-family="Times Roman,serif" font-size="10.00">GCAAC</text>
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-<!-- 5,3&#45;&gt;6,1 -->
-<g id="edge492" class="edge"><title>5,3&#45;&gt;6,1</title>
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-<ellipse fill="none" stroke="black" cx="1020" cy="-1444" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="1000.5" y="-1455.17" font-family="Times Roman,serif" font-size="10.00">4,2&#45;&#45;null</text>
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-<text text-anchor="start" x="1004" y="-1426.67" font-family="Times Roman,serif" font-size="10.00">ACCCT</text>
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-<!-- 5,4&#45;&gt;4,2 -->
-<g id="edge496" class="edge"><title>5,4&#45;&gt;4,2</title>
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-<ellipse fill="none" stroke="black" cx="886" cy="-1444" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="866.5" y="-1455.17" font-family="Times Roman,serif" font-size="10.00">4,1&#45;&#45;null</text>
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-<text text-anchor="start" x="870.5" y="-1426.67" font-family="Times Roman,serif" font-size="10.00">CCCTC</text>
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-<!-- 4,1&#45;&gt;4,2 -->
-<g id="edge64" class="edge"><title>4,1&#45;&gt;4,2</title>
-<path fill="none" stroke="#dd1e2f" d="M928.398,-1437.67C940.741,-1437.23 954.377,-1437.14 967.273,-1437.39"/>
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-<g id="edge68" class="edge"><title>4,2&#45;&gt;5,4</title>
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-<g id="edge70" class="edge"><title>4,2&#45;&gt;4,1</title>
-<path fill="none" stroke="#218559" d="M977.417,-1450.33C965.062,-1450.77 951.424,-1450.86 938.535,-1450.61"/>
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-<!-- 4,2&#45;&gt;4,3 -->
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-<!-- 4,3&#45;&gt;3,4 -->
-<g id="edge74" class="edge"><title>4,3&#45;&gt;3,4</title>
-<path fill="none" stroke="#218559" d="M1148.63,-1408C1136.11,-1323.98 1106,-1122 1106,-1122 1106,-1122 1088,-453 1088,-453 1088,-453 1045.65,-203.273 1027.79,-97.9643"/>
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-<!-- 4,3&#45;&gt;4,2 -->
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-<path fill="none" stroke="#218559" d="M1111.42,-1450.33C1099.06,-1450.77 1085.42,-1450.86 1072.54,-1450.61"/>
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-<g id="edge78" class="edge"><title>4,4&#45;&gt;5,2</title>
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-<g id="edge504" class="edge"><title>7,1&#45;&gt;24,2</title>
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-<path fill="none" stroke="#218559" d="M451.161,-4652.53C433.641,-4665.08 411.867,-4680.68 393.012,-4694.19"/>
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-<!-- 7,1&#45;&gt;7,2 -->
-<g id="edge500" class="edge"><title>7,1&#45;&gt;7,2</title>
-<path fill="none" stroke="#dd1e2f" d="M526.398,-4622.67C538.741,-4622.23 552.377,-4622.14 565.273,-4622.39"/>
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-<text text-anchor="start" x="604.5" y="-5006.67" font-family="Times Roman,serif" font-size="10.00">ATTTC</text>
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-<g id="edge502" class="edge"><title>7,1&#45;&gt;8,3</title>
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-<text text-anchor="start" x="333" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">GAAAC</text>
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-<g id="edge514" class="edge"><title>7,2&#45;&gt;24,1</title>
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-<!-- 7,3&#45;&gt;7,2 -->
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-<text text-anchor="start" x="870" y="-4611.67" font-family="Times Roman,serif" font-size="10.00">TGCTG</text>
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-<!-- 7,3&#45;&gt;7,4 -->
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-<text text-anchor="start" x="732.5" y="-3142.17" font-family="Times Roman,serif" font-size="10.00">6,2&#45;&#45;null</text>
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-<text text-anchor="start" x="735" y="-3113.67" font-family="Times Roman,serif" font-size="10.00">AGCAA</text>
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-<!-- 9,2&#45;&gt;9,3 -->
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-<!-- 8,3&#45;&gt;7,1 -->
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-<!-- 11,1&#45;&gt;11,2 -->
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-<!-- 11,1&#45;&gt;12,2 -->
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-<!-- 11,2&#45;&gt;11,1 -->
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-<!-- 11,2&#45;&gt;11,3 -->
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-<g id="edge552" class="edge"><title>11,2&#45;&gt;10,1</title>
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-<!-- 11,4 -->
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-<!-- 11,3&#45;&gt;11,4 -->
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-<!-- 13,2 -->
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-<ellipse fill="none" stroke="black" cx="484" cy="-468" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-479.167" font-family="Times Roman,serif" font-size="10.00">13,2&#45;&#45;null</text>
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-<!-- 13,1&#45;&gt;13,2 -->
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-<text text-anchor="start" x="461.5" y="-383.167" font-family="Times Roman,serif" font-size="10.00">14,2&#45;&#45;null</text>
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-<!-- 13,2&#45;&gt;13,1 -->
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-<!-- 13,3 -->
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-<text text-anchor="start" x="601" y="-450.667" font-family="Times Roman,serif" font-size="10.00">CAGAG</text>
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-<!-- 13,2&#45;&gt;13,3 -->
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-<path fill="none" stroke="#dd1e2f" d="M530.867,-461.529C540.501,-461.254 550.748,-461.183 560.703,-461.313"/>
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-<text text-anchor="start" x="327.5" y="-575.167" font-family="Times Roman,serif" font-size="10.00">12,1&#45;&#45;null</text>
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-<text text-anchor="start" x="335" y="-560.667" font-family="Times Roman,serif" font-size="10.00">CTCTG</text>
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-<polygon fill="#218559" stroke="#218559" points="540.937,-471.18 530.867,-474.471 540.792,-478.179 540.937,-471.18"/>
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-<!-- 13,4 -->
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-<text text-anchor="start" x="735" y="-450.667" font-family="Times Roman,serif" font-size="10.00">CCAGA</text>
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-<!-- 13,3&#45;&gt;13,4 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-464.817 704.933,-461.523 695.007,-457.819 694.864,-464.817"/>
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-<g id="node137" class="node"><title>14,4</title>
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-<!-- 13,4&#45;&gt;12,3 -->
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-<!-- 12,1&#45;&gt;13,2 -->
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-<!-- 12,1&#45;&gt;12,2 -->
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-<path fill="none" stroke="#218559" d="M436.933,-570.477C427.29,-570.749 417.041,-570.817 407.091,-570.684"/>
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-<!-- 12,2&#45;&gt;12,3 -->
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-<!-- 12,3&#45;&gt;12,2 -->
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-<!-- 15,1&#45;&gt;15,2 -->
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-<!-- 15,3&#45;&gt;15,4 -->
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-<path fill="none" stroke="#dd1e2f" d="M664.867,-269.529C674.501,-269.254 684.748,-269.183 694.703,-269.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-272.817 704.933,-269.523 695.007,-265.819 694.864,-272.817"/>
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-<!-- 16,4 -->
-<g id="node147" class="node"><title>16,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-148" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,4&#45;&#45;null</text>
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-<text text-anchor="start" x="736" y="-144.667" font-family="Times Roman,serif" font-size="10.00">GGCAT</text>
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-<text text-anchor="start" x="736" y="-130.667" font-family="Times Roman,serif" font-size="10.00">ATGCC</text>
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-<!-- 15,3&#45;&gt;16,4 -->
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-<!-- 15,4&#45;&gt;15,3 -->
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-<polygon fill="#218559" stroke="#218559" points="674.937,-279.18 664.867,-282.471 674.792,-286.179 674.937,-279.18"/>
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-<!-- 14,3 -->
-<g id="node136" class="node"><title>14,3</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-372" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-383.167" font-family="Times Roman,serif" font-size="10.00">14,3&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="593,-364 593,-378 644,-378 644,-364 593,-364"/>
-<text text-anchor="start" x="604" y="-368.667" font-family="Times Roman,serif" font-size="10.00">ATCTC</text>
-<polygon fill="#218559" stroke="#218559" points="593,-350 593,-364 644,-364 644,-350 593,-350"/>
-<text text-anchor="start" x="602" y="-354.667" font-family="Times Roman,serif" font-size="10.00">GAGAT</text>
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-<!-- 15,4&#45;&gt;14,3 -->
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-<path fill="none" stroke="#dd1e2f" d="M720.16,-303.016C703.283,-317.336 686,-332 686,-332 686,-332 676.3,-337.706 664.227,-344.808"/>
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-<!-- 14,1&#45;&gt;15,2 -->
-<g id="edge168" class="edge"><title>14,1&#45;&gt;15,2</title>
-<path fill="none" stroke="#218559" d="M384.857,-347.028C402.072,-334.694 422.998,-319.703 441.18,-306.677"/>
-<polygon fill="#218559" stroke="#218559" points="443.227,-309.516 449.317,-300.847 439.15,-303.826 443.227,-309.516"/>
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-<!-- 14,1&#45;&gt;14,2 -->
-<g id="edge166" class="edge"><title>14,1&#45;&gt;14,2</title>
-<path fill="none" stroke="#dd1e2f" d="M396.867,-365.529C406.501,-365.254 416.748,-365.183 426.703,-365.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="426.864,-368.817 436.933,-365.523 427.007,-361.819 426.864,-368.817"/>
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-<!-- 14,2&#45;&gt;13,1 -->
-<g id="edge170" class="edge"><title>14,2&#45;&gt;13,1</title>
-<path fill="none" stroke="#dd1e2f" d="M449.317,-396.847C432.127,-409.162 411.205,-424.152 393.005,-437.191"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="390.948,-434.359 384.857,-443.028 395.025,-440.049 390.948,-434.359"/>
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-<!-- 14,2&#45;&gt;14,1 -->
-<g id="edge174" class="edge"><title>14,2&#45;&gt;14,1</title>
-<path fill="none" stroke="#218559" d="M436.933,-378.477C427.29,-378.749 417.041,-378.817 407.091,-378.684"/>
-<polygon fill="#218559" stroke="#218559" points="406.937,-375.18 396.867,-378.471 406.792,-382.179 406.937,-375.18"/>
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-<!-- 14,2&#45;&gt;14,3 -->
-<g id="edge172" class="edge"><title>14,2&#45;&gt;14,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-365.529C540.501,-365.254 550.748,-365.183 560.703,-365.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="560.864,-368.817 570.933,-365.523 561.007,-361.819 560.864,-368.817"/>
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-<!-- 14,3&#45;&gt;15,4 -->
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-<path fill="none" stroke="#218559" d="M652.857,-347.028C670.072,-334.694 690.998,-319.703 709.18,-306.677"/>
-<polygon fill="#218559" stroke="#218559" points="711.227,-309.516 717.317,-300.847 707.15,-303.826 711.227,-309.516"/>
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-<!-- 14,3&#45;&gt;14,2 -->
-<g id="edge180" class="edge"><title>14,3&#45;&gt;14,2</title>
-<path fill="none" stroke="#218559" d="M570.933,-378.477C561.29,-378.749 551.041,-378.817 541.091,-378.684"/>
-<polygon fill="#218559" stroke="#218559" points="540.937,-375.18 530.867,-378.471 540.792,-382.179 540.937,-375.18"/>
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-<!-- 14,3&#45;&gt;14,4 -->
-<g id="edge176" class="edge"><title>14,3&#45;&gt;14,4</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-365.529C674.501,-365.254 684.748,-365.183 694.703,-365.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-368.817 704.933,-365.523 695.007,-361.819 694.864,-368.817"/>
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-<!-- 14,4&#45;&gt;13,3 -->
-<g id="edge182" class="edge"><title>14,4&#45;&gt;13,3</title>
-<path fill="none" stroke="#dd1e2f" d="M717.317,-396.847C700.127,-409.162 679.205,-424.152 661.005,-437.191"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="658.948,-434.359 652.857,-443.028 663.025,-440.049 658.948,-434.359"/>
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-<!-- 14,4&#45;&gt;14,3 -->
-<g id="edge184" class="edge"><title>14,4&#45;&gt;14,3</title>
-<path fill="none" stroke="#218559" d="M704.933,-378.477C695.29,-378.749 685.041,-378.817 675.091,-378.684"/>
-<polygon fill="#218559" stroke="#218559" points="674.937,-375.18 664.867,-378.471 674.792,-382.179 674.937,-375.18"/>
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-<!-- 17,1&#45;&gt;24,1 -->
-<g id="edge614" class="edge"><title>17,1&#45;&gt;24,1</title>
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-<!-- 17,1&#45;&gt;23,2 -->
-<g id="edge610" class="edge"><title>17,1&#45;&gt;23,2</title>
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-<!-- 17,1&#45;&gt;17,2 -->
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-<path fill="none" stroke="#dd1e2f" d="M396.867,-3941.53C406.501,-3941.25 416.748,-3941.18 426.703,-3941.31"/>
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-<g id="node156" class="node"><title>18,3</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-4463" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-4474.17" font-family="Times Roman,serif" font-size="10.00">18,3&#45;&#45;null</text>
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-<text text-anchor="start" x="470" y="-4459.67" font-family="Times Roman,serif" font-size="10.00">TTTCA</text>
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-<text text-anchor="start" x="467.5" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">TGAAA</text>
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-<!-- 17,1&#45;&gt;18,3 -->
-<g id="edge612" class="edge"><title>17,1&#45;&gt;18,3</title>
-<path fill="none" stroke="#06a2cb" d="M365.188,-3913.83C379.25,-3882.19 398,-3840 398,-3840 398,-3840 416,-3775 416,-3775 416,-3775 418,-3775 418,-3775 418,-3775 428,-4162 428,-4162 428,-4162 459.813,-4333 475.483,-4417.22"/>
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-<!-- 17,2&#45;&gt;23,1 -->
-<g id="edge620" class="edge"><title>17,2&#45;&gt;23,1</title>
-<path fill="none" stroke="#06a2cb" d="M453.052,-3975.63C440.1,-3987.2 428,-3998 428,-3998 428,-3998 416,-4190 416,-4190 416,-4190 398,-4511 398,-4511 398,-4511 374.399,-4616.22 360.296,-4679.1"/>
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-<!-- 17,2&#45;&gt;17,1 -->
-<g id="edge622" class="edge"><title>17,2&#45;&gt;17,1</title>
-<path fill="none" stroke="#218559" d="M436.933,-3954.48C427.29,-3954.75 417.041,-3954.82 407.091,-3954.68"/>
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-<!-- 17,3 -->
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-<ellipse fill="none" stroke="black" cx="618" cy="-3948" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,3&#45;&#45;null</text>
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-<text text-anchor="start" x="600.5" y="-3944.67" font-family="Times Roman,serif" font-size="10.00">AACGG</text>
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-<text text-anchor="start" x="603" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">CCGTT</text>
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-<!-- 17,2&#45;&gt;17,3 -->
-<g id="edge618" class="edge"><title>17,2&#45;&gt;17,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-3941.53C540.501,-3941.25 550.748,-3941.18 560.703,-3941.31"/>
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-<!-- 16,1 -->
-<g id="node144" class="node"><title>16,1</title>
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-<text text-anchor="start" x="327.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,1&#45;&#45;null</text>
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-<text text-anchor="start" x="332.5" y="-144.667" font-family="Times Roman,serif" font-size="10.00">AACGG</text>
-<polygon fill="#218559" stroke="#218559" points="325,-126 325,-140 376,-140 376,-126 325,-126"/>
-<text text-anchor="start" x="335" y="-130.667" font-family="Times Roman,serif" font-size="10.00">CCGTT</text>
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-<!-- 17,2&#45;&gt;16,1 -->
-<g id="edge616" class="edge"><title>17,2&#45;&gt;16,1</title>
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-<!-- 17,3&#45;&gt;17,2 -->
-<g id="edge628" class="edge"><title>17,3&#45;&gt;17,2</title>
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-<!-- 17,4 -->
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-<text text-anchor="start" x="729.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,4&#45;&#45;null</text>
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-<text text-anchor="start" x="734.5" y="-3944.67" font-family="Times Roman,serif" font-size="10.00">ACGGC</text>
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-<text text-anchor="start" x="735.5" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">GCCGT</text>
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-<!-- 17,3&#45;&gt;17,4 -->
-<g id="edge624" class="edge"><title>17,3&#45;&gt;17,4</title>
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-<!-- 17,3&#45;&gt;18,1 -->
-<g id="edge626" class="edge"><title>17,3&#45;&gt;18,1</title>
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-<!-- 17,4&#45;&gt;17,3 -->
-<g id="edge632" class="edge"><title>17,4&#45;&gt;17,3</title>
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-<ellipse fill="none" stroke="black" cx="618" cy="-148" rx="46.8775" ry="36.0624"/>
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-<!-- 17,4&#45;&gt;16,3 -->
-<g id="edge630" class="edge"><title>17,4&#45;&gt;16,3</title>
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-<!-- 19,4&#45;&gt;8,3 -->
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-<!-- 19,4&#45;&gt;18,2 -->
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-<!-- 18,1&#45;&gt;23,1 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="325.153,-4684.1 332.822,-4691.41 331.385,-4680.92 325.153,-4684.1"/>
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-<!-- 18,1&#45;&gt;18,2 -->
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-<!-- 18,2&#45;&gt;18,3 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="426.864,-4459.82 436.933,-4456.52 427.007,-4452.82 426.864,-4459.82"/>
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-<g id="edge222" class="edge"><title>18,3&#45;&gt;17,1</title>
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-<!-- 18,3&#45;&gt;18,2 -->
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-<!-- 18,3&#45;&gt;18,4 -->
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-<g id="edge228" class="edge"><title>18,4&#45;&gt;24,1</title>
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-<!-- 18,4&#45;&gt;19,2 -->
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-<!-- 31,1 -->
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-<!-- 31,2 -->
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-<ellipse fill="none" stroke="black" cx="752" cy="-1732" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-1743.17" font-family="Times Roman,serif" font-size="10.00">31,2&#45;&#45;null</text>
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-<text text-anchor="start" x="735.5" y="-1714.67" font-family="Times Roman,serif" font-size="10.00">TGACG</text>
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-<!-- 31,1&#45;&gt;31,2 -->
-<g id="edge786" class="edge"><title>31,1&#45;&gt;31,2</title>
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-<ellipse fill="none" stroke="black" cx="752" cy="-1974" rx="46.8775" ry="36.0624"/>
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-<!-- 31,1&#45;&gt;32,2 -->
-<g id="edge788" class="edge"><title>31,1&#45;&gt;32,2</title>
-<path fill="none" stroke="#218559" d="M636.491,-1765.39C660.503,-1808.76 702.432,-1884.48 728.624,-1931.78"/>
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-<g id="edge796" class="edge"><title>31,2&#45;&gt;31,1</title>
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-<g id="edge790" class="edge"><title>31,2&#45;&gt;30,1</title>
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-<!-- 37,1 -->
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-<!-- 37,2&#45;&gt;36,4 -->
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-<text text-anchor="start" x="737" y="-1536.67" font-family="Times Roman,serif" font-size="10.00">GCTTA</text>
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-<!-- 36,3 -->
-<g id="node176" class="node"><title>36,3</title>
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-<text text-anchor="start" x="1131.5" y="-1085.17" font-family="Times Roman,serif" font-size="10.00">36,3&#45;&#45;null</text>
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-<text text-anchor="start" x="1137" y="-1070.67" font-family="Times Roman,serif" font-size="10.00">GCGTG</text>
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-<text text-anchor="start" x="1137" y="-1056.67" font-family="Times Roman,serif" font-size="10.00">CACGC</text>
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-<!-- 36,2&#45;&gt;36,3 -->
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-<!-- 36,3&#45;&gt;36,2 -->
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-<!-- 36,3&#45;&gt;36,4 -->
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-<!-- 35,1 -->
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-<text text-anchor="start" x="469" y="-1632.67" font-family="Times Roman,serif" font-size="10.00">TCGCT</text>
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-<!-- 35,2 -->
-<g id="node180" class="node"><title>35,2</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-1636" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-1647.17" font-family="Times Roman,serif" font-size="10.00">35,2&#45;&#45;null</text>
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-<text text-anchor="start" x="602.5" y="-1632.67" font-family="Times Roman,serif" font-size="10.00">CGCTT</text>
-<polygon fill="#218559" stroke="#218559" points="593,-1614 593,-1628 644,-1628 644,-1614 593,-1614"/>
-<text text-anchor="start" x="600.5" y="-1618.67" font-family="Times Roman,serif" font-size="10.00">AAGCG</text>
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-<!-- 35,1&#45;&gt;35,2 -->
-<g id="edge836" class="edge"><title>35,1&#45;&gt;35,2</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-1629.53C540.501,-1629.25 550.748,-1629.18 560.703,-1629.31"/>
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-<!-- 35,2&#45;&gt;35,1 -->
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-<!-- 34,1 -->
-<g id="node184" class="node"><title>34,1</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-756" rx="46.8775" ry="36.0624"/>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="593,-748 593,-762 644,-762 644,-748 593,-748"/>
-<text text-anchor="start" x="603" y="-752.667" font-family="Times Roman,serif" font-size="10.00">GCTTA</text>
-<polygon fill="#218559" stroke="#218559" points="593,-734 593,-748 644,-748 644,-734 593,-734"/>
-<text text-anchor="start" x="602" y="-738.667" font-family="Times Roman,serif" font-size="10.00">TAAGC</text>
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-<!-- 35,2&#45;&gt;34,1 -->
-<g id="edge838" class="edge"><title>35,2&#45;&gt;34,1</title>
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-<!-- 34,4 -->
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-<ellipse fill="none" stroke="black" cx="1020" cy="-756" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="997.5" y="-767.167" font-family="Times Roman,serif" font-size="10.00">34,4&#45;&#45;null</text>
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-<text text-anchor="start" x="1005" y="-738.667" font-family="Times Roman,serif" font-size="10.00">GCTTA</text>
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-<!-- 35,2&#45;&gt;34,4 -->
-<g id="edge842" class="edge"><title>35,2&#45;&gt;34,4</title>
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-<!-- 35,3&#45;&gt;36,1 -->
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-<!-- 35,3&#45;&gt;35,2 -->
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-<!-- 35,4 -->
-<g id="node182" class="node"><title>35,4</title>
-<ellipse fill="none" stroke="black" cx="886" cy="-1636" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="863.5" y="-1647.17" font-family="Times Roman,serif" font-size="10.00">35,4&#45;&#45;null</text>
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-<text text-anchor="start" x="871" y="-1618.67" font-family="Times Roman,serif" font-size="10.00">TTAAG</text>
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-<!-- 35,3&#45;&gt;35,4 -->
-<g id="edge846" class="edge"><title>35,3&#45;&gt;35,4</title>
-<path fill="none" stroke="#dd1e2f" d="M798.867,-1629.53C808.501,-1629.25 818.748,-1629.18 828.703,-1629.31"/>
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-<!-- 32,1 -->
-<g id="node194" class="node"><title>32,1</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-1974" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-1985.17" font-family="Times Roman,serif" font-size="10.00">32,1&#45;&#45;null</text>
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-<text text-anchor="start" x="602.5" y="-1956.67" font-family="Times Roman,serif" font-size="10.00">CGCTT</text>
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-<!-- 35,3&#45;&gt;32,1 -->
-<g id="edge850" class="edge"><title>35,3&#45;&gt;32,1</title>
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-<!-- 35,4&#45;&gt;35,3 -->
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-<!-- 34,2 -->
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-<ellipse fill="none" stroke="black" cx="752" cy="-756" rx="46.8775" ry="36.0624"/>
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-<text text-anchor="start" x="737" y="-738.667" font-family="Times Roman,serif" font-size="10.00">TTAAG</text>
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-<!-- 35,4&#45;&gt;34,2 -->
-<g id="edge856" class="edge"><title>35,4&#45;&gt;34,2</title>
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-<text text-anchor="start" x="871" y="-738.667" font-family="Times Roman,serif" font-size="10.00">CTTAA</text>
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-<!-- 35,4&#45;&gt;34,3 -->
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/bubble_test1.txt b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/bubble_test1.txt
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index 2896107..0000000
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index 558e102..0000000
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/fr_with_tip.txt.binmerge b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/fr_with_tip.txt.binmerge
deleted file mode 100755
index ea96248..0000000
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deleted file mode 100644
index 404bd2d..0000000
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/rf_test.txt.binmerge b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/rf_test.txt.binmerge
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index 036bbfb..0000000
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index 926e39c..0000000
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deleted file mode 100755
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-<text text-anchor="start" x="309" y="-257.667" font-family="Times Roman,serif" font-size="10.00">TAGAA</text>
-<polygon fill="#218559" stroke="#218559" points="303,-239 303,-253 348,-253 348,-239 303,-239"/>
-<text text-anchor="start" x="311.5" y="-243.667" font-family="Times Roman,serif" font-size="10.00">TTCTA</text>
-</g>
-<!-- 1,2&#45;&gt;1,3 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="272.364,-257.822 282.443,-254.554 272.527,-250.823 272.364,-257.822"/>
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-<!-- 1,3&#45;&gt;1,2 -->
-<g id="edge39" class="edge"><title>1,3&#45;&gt;1,2</title>
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-<polygon fill="#218559" stroke="#218559" points="253.407,-264.175 243.327,-267.438 253.242,-271.173 253.407,-264.175"/>
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-<!-- 1,4 -->
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-<text text-anchor="start" x="435" y="-243.667" font-family="Times Roman,serif" font-size="10.00">CTTCT</text>
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-<!-- 1,3&#45;&gt;1,4 -->
-<g id="edge37" class="edge"><title>1,3&#45;&gt;1,4</title>
-<path fill="none" stroke="#dd1e2f" d="M367.327,-254.562C376.601,-254.258 386.531,-254.176 396.159,-254.316"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="396.364,-257.822 406.443,-254.554 396.527,-250.823 396.364,-257.822"/>
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-<text text-anchor="start" x="431.5" y="-161.667" font-family="Times Roman,serif" font-size="10.00">AGAAG</text>
-<polygon fill="#218559" stroke="#218559" points="427,-143 427,-157 472,-157 472,-143 427,-143"/>
-<text text-anchor="start" x="435" y="-147.667" font-family="Times Roman,serif" font-size="10.00">CTTCT</text>
-</g>
-<!-- 1,3&#45;&gt;2,1 -->
-<g id="edge35" class="edge"><title>1,3&#45;&gt;2,1</title>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="413.518,-199.846 418.857,-190.695 408.977,-194.519 413.518,-199.846"/>
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-<!-- 1,4&#45;&gt;1,3 -->
-<g id="edge43" class="edge"><title>1,4&#45;&gt;1,3</title>
-<path fill="none" stroke="#218559" d="M406.443,-267.446C397.158,-267.745 387.225,-267.824 377.602,-267.681"/>
-<polygon fill="#218559" stroke="#218559" points="377.407,-264.175 367.327,-267.438 377.242,-271.173 377.407,-264.175"/>
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-<!-- 2,2 -->
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-<text text-anchor="start" x="555.5" y="-161.667" font-family="Times Roman,serif" font-size="10.00">GAAGC</text>
-<polygon fill="#218559" stroke="#218559" points="551,-143 551,-157 596,-157 596,-143 551,-143"/>
-<text text-anchor="start" x="558" y="-147.667" font-family="Times Roman,serif" font-size="10.00">GCTTC</text>
-</g>
-<!-- 1,4&#45;&gt;2,2 -->
-<g id="edge41" class="edge"><title>1,4&#45;&gt;2,2</title>
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-<polygon fill="#218559" stroke="#218559" points="501.407,-168.175 491.327,-171.438 501.242,-175.173 501.407,-168.175"/>
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-<text text-anchor="start" x="681" y="-147.667" font-family="Times Roman,serif" font-size="10.00">GGCTT</text>
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-<path fill="none" stroke="#218559" d="M654.443,-171.446C645.158,-171.745 635.225,-171.824 625.602,-171.681"/>
-<polygon fill="#218559" stroke="#218559" points="625.407,-168.175 615.327,-171.438 625.242,-175.173 625.407,-168.175"/>
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-<text text-anchor="start" x="804" y="-147.667" font-family="Times Roman,serif" font-size="10.00">GGGCT</text>
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diff --git a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/walk_random_seq1.txt b/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/walk_random_seq1.txt
deleted file mode 100644
index 6f5837e..0000000
--- a/genomix/genomix-hadoop/src/test/resources/expected/graphbuild-unmerged/walk_random_seq1.txt
+++ /dev/null
@@ -1,148 +0,0 @@
-((2,1)	[(2,2)]	[]	[]	[]	CCTCG)	(null)
-((2,2)	[(2,3)]	[(1,4)]	[]	[(2,1)]	CTCGC)	(null)
-((2,3)	[(2,4)]	[]	[]	[(2,2)]	TCGCA)	(null)
-((2,4)	[]	[(1,2)]	[]	[(2,3)]	CGCAC)	(null)
-((4,1)	[(4,2)]	[]	[]	[]	GAGGG)	(null)
-((4,2)	[(4,3)]	[(5,4)]	[]	[(4,1)]	AGGGT)	(null)
-((4,3)	[(4,4)]	[]	[]	[(3,4),(4,2)]	GGGTT)	(null)
-((4,4)	[]	[(5,2)]	[]	[(4,3)]	GGTTG)	(null)
-((6,1)	[(6,2)]	[]	[(5,3)]	[]	GTTGC)	(null)
-((6,2)	[(6,3)]	[(7,4)]	[]	[(6,1)]	TTGCT)	(null)
-((6,3)	[(6,4)]	[]	[(5,1)]	[(6,2)]	TGCTG)	(null)
-((6,4)	[]	[(7,2)]	[]	[(6,3)]	GCTGA)	(null)
-((8,1)	[(24,1),(8,2)]	[]	[(7,3)]	[]	CTGAA)	(null)
-((8,2)	[(8,3)]	[(9,4)]	[]	[(8,1)]	TGAAA)	(null)
-((8,3)	[(8,4)]	[]	[(7,1)]	[(19,4),(8,2)]	GAAAT)	(null)
-((8,4)	[]	[(9,2)]	[]	[(8,3)]	AAATC)	(null)
-((10,1)	[(10,2)]	[]	[]	[(11,2)]	GGCAG)	(null)
-((10,2)	[(9,1),(10,3)]	[]	[]	[(10,1)]	GCAGA)	(null)
-((10,3)	[(10,4)]	[]	[]	[(11,4),(10,2)]	CAGAT)	(null)
-((10,4)	[(9,3)]	[]	[]	[(10,3)]	AGATT)	(null)
-((12,1)	[(12,2)]	[]	[]	[(13,2)]	CTCTG)	(null)
-((12,2)	[(11,1),(12,3)]	[]	[]	[(12,1)]	TCTGG)	(null)
-((12,3)	[(12,4)]	[]	[]	[(13,4),(12,2)]	CTGGC)	(null)
-((12,4)	[(11,3)]	[]	[]	[(12,3)]	TGGCA)	(null)
-((14,1)	[(14,2)]	[]	[]	[(15,2)]	GCATC)	(null)
-((14,2)	[(13,1),(14,3)]	[]	[]	[(14,1)]	CATCT)	(null)
-((14,3)	[(14,4)]	[]	[]	[(15,4),(14,2)]	ATCTC)	(null)
-((14,4)	[(13,3)]	[]	[]	[(14,3)]	TCTCT)	(null)
-((16,1)	[(16,2)]	[]	[]	[(17,2)]	AACGG)	(null)
-((16,2)	[(15,1),(16,3)]	[]	[]	[(16,1)]	ACGGC)	(null)
-((16,3)	[(16,4)]	[]	[]	[(17,4),(16,2)]	CGGCA)	(null)
-((16,4)	[(15,3)]	[]	[]	[(16,3)]	GGCAT)	(null)
-((18,1)	[(23,1),(18,2)]	[]	[(17,3)]	[]	CGTTT)	(null)
-((18,2)	[(7,1),(18,3)]	[(19,4)]	[]	[(18,1)]	GTTTC)	(null)
-((18,3)	[(18,4)]	[]	[(17,1)]	[(18,2)]	TTTCA)	(null)
-((18,4)	[]	[(19,2)]	[(24,1)]	[(18,3)]	TTCAA)	(null)
-((20,1)	[(20,2)]	[]	[(19,3)]	[]	TCAAT)	(null)
-((20,2)	[(21,1),(20,3)]	[]	[]	[(20,1)]	CAATA)	(null)
-((20,3)	[(20,4)]	[]	[(19,1)]	[(20,2)]	AATAC)	(null)
-((20,4)	[(21,3)]	[]	[]	[(20,3)]	ATACG)	(null)
-((22,1)	[(22,2)]	[]	[]	[(28,1),(27,3),(21,2)]	TACGT)	(null)
-((22,2)	[(22,3)]	[(23,4)]	[]	[(27,4),(22,1)]	ACGTG)	(null)
-((22,3)	[(22,4)]	[]	[]	[(21,4),(22,2)]	CGTGA)	(null)
-((22,4)	[]	[(23,2)]	[]	[(22,3)]	GTGAA)	(null)
-((24,1)	[(17,1),(24,2)]	[]	[(23,3),(18,4),(7,2)]	[(8,1),(19,3)]	TGAAA)	(null)
-((24,2)	[(25,1),(24,3)]	[]	[(7,1)]	[(19,4),(24,1)]	GAAAC)	(null)
-((24,3)	[(24,4)]	[]	[(23,1)]	[(24,2)]	AAACT)	(null)
-((24,4)	[(25,3)]	[]	[]	[(24,3)]	AACTA)	(null)
-((26,1)	[(26,2)]	[]	[(27,3)]	[]	GTAAT)	(null)
-((26,2)	[(26,3)]	[(25,4)]	[]	[(26,1)]	TAATA)	(null)
-((26,3)	[(26,4)]	[]	[(27,1)]	[(26,2)]	AATAG)	(null)
-((26,4)	[]	[(25,2)]	[]	[(26,3)]	ATAGT)	(null)
-((28,1)	[(22,1),(28,2)]	[]	[]	[(27,2)]	TTACG)	(null)
-((28,2)	[(28,3)]	[(29,4)]	[]	[(28,1)]	TACGT)	(null)
-((28,3)	[(28,4)]	[]	[]	[(27,4),(28,2)]	ACGTC)	(null)
-((28,4)	[(31,3)]	[(29,2)]	[]	[(28,3)]	CGTCA)	(null)
-((30,1)	[(30,2)]	[]	[(29,3)]	[(31,2)]	GTCAT)	(null)
-((30,2)	[(29,1),(30,3)]	[(31,4)]	[]	[(30,1)]	TCATG)	(null)
-((30,3)	[(30,4)]	[]	[(29,1)]	[(31,4),(30,2)]	CATGA)	(null)
-((30,4)	[(29,3)]	[(31,2)]	[]	[(30,3)]	ATGAC)	(null)
-((32,1)	[(32,2)]	[]	[(33,3),(35,3)]	[]	AAGCG)	(null)
-((32,2)	[(31,1),(32,3)]	[]	[]	[(32,1)]	AGCGT)	(null)
-((32,3)	[(32,4)]	[]	[]	[(32,2)]	GCGTC)	(null)
-((32,4)	[(31,3)]	[(29,2)]	[]	[(32,3)]	CGTCA)	(null)
-((34,1)	[(34,2)]	[]	[]	[(33,2),(35,2)]	GCTTA)	(null)
-((34,2)	[(34,3)]	[(35,4),(33,4)]	[]	[(34,1)]	CTTAA)	(null)
-((34,3)	[(34,4)]	[]	[]	[(35,4),(33,4),(34,2)]	TTAAG)	(null)
-((34,4)	[]	[(33,2),(35,2)]	[]	[(34,3)]	TAAGC)	(null)
-((36,1)	[(36,2)]	[]	[(33,3),(35,3)]	[]	AAGCG)	(null)
-((36,2)	[(36,3)]	[(37,4)]	[]	[(36,1)]	AGCGT)	(null)
-((36,3)	[(36,4)]	[]	[]	[(36,2)]	GCGTG)	(null)
-((36,4)	[]	[(37,2)]	[]	[(36,3)]	CGTGT)	(null)
-((1,1)	[(1,2)]	[]	[]	[]	TAGTG)	(null)
-((1,2)	[(1,3)]	[(2,4)]	[]	[(1,1)]	AGTGC)	(null)
-((1,3)	[(1,4)]	[]	[]	[(1,2)]	GTGCG)	(null)
-((1,4)	[]	[(2,2)]	[]	[(1,3)]	TGCGA)	(null)
-((3,1)	[(3,2)]	[]	[]	[]	GCTAG)	(null)
-((3,2)	[(3,3)]	[]	[]	[(3,1)]	CTAGG)	(null)
-((3,3)	[(3,4)]	[]	[]	[(3,2)]	TAGGG)	(null)
-((3,4)	[(4,3)]	[]	[]	[(3,3)]	AGGGT)	(null)
-((5,1)	[(5,2)]	[]	[(6,3)]	[]	AGCAA)	(null)
-((5,2)	[(5,3)]	[(4,4)]	[]	[(5,1)]	GCAAC)	(null)
-((5,3)	[(5,4)]	[]	[(6,1)]	[(5,2)]	CAACC)	(null)
-((5,4)	[]	[(4,2)]	[]	[(5,3)]	AACCC)	(null)
-((7,1)	[(7,2)]	[]	[(8,3),(24,2)]	[(18,2),(23,1)]	TTTCA)	(null)
-((7,2)	[(7,3)]	[(6,4)]	[(24,1)]	[(7,1)]	TTCAG)	(null)
-((7,3)	[(7,4)]	[]	[(8,1)]	[(7,2)]	TCAGC)	(null)
-((7,4)	[]	[(6,2)]	[]	[(7,3)]	CAGCA)	(null)
-((9,1)	[(9,2)]	[]	[]	[(10,2)]	CAGAT)	(null)
-((9,2)	[(9,3)]	[(8,4)]	[]	[(9,1)]	AGATT)	(null)
-((9,3)	[(9,4)]	[]	[]	[(10,4),(9,2)]	GATTT)	(null)
-((9,4)	[]	[(8,2)]	[]	[(9,3)]	ATTTC)	(null)
-((11,1)	[(11,2)]	[]	[]	[(12,2)]	CTGGC)	(null)
-((11,2)	[(10,1),(11,3)]	[]	[]	[(11,1)]	TGGCA)	(null)
-((11,3)	[(11,4)]	[]	[]	[(12,4),(11,2)]	GGCAG)	(null)
-((11,4)	[(10,3)]	[]	[]	[(11,3)]	GCAGA)	(null)
-((13,1)	[(13,2)]	[]	[]	[(14,2)]	ATCTC)	(null)
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-<text text-anchor="start" x="327.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,1&#45;&#45;null</text>
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-<text text-anchor="start" x="336" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">GTTTC</text>
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-<!-- 24,1&#45;&gt;17,1 -->
-<g id="edge278" class="edge"><title>24,1&#45;&gt;17,1</title>
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-<text text-anchor="start" x="327.5" y="-5227.17" font-family="Times Roman,serif" font-size="10.00">19,3&#45;&#45;null</text>
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-<ellipse fill="none" stroke="black" cx="618" cy="-4463" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-4474.17" font-family="Times Roman,serif" font-size="10.00">18,4&#45;&#45;null</text>
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-<text text-anchor="start" x="602.5" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">TTGAA</text>
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-<!-- 24,1&#45;&gt;18,4 -->
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-<polygon fill="#218559" stroke="#218559" points="540.937,-5123.18 530.867,-5126.47 540.792,-5130.18 540.937,-5123.18"/>
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-<ellipse fill="none" stroke="black" cx="752" cy="-5120" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-5131.17" font-family="Times Roman,serif" font-size="10.00">24,3&#45;&#45;null</text>
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-<text text-anchor="start" x="737.5" y="-5102.67" font-family="Times Roman,serif" font-size="10.00">AGTTT</text>
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-<!-- 24,2&#45;&gt;24,3 -->
-<g id="edge294" class="edge"><title>24,2&#45;&gt;24,3</title>
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-<text text-anchor="start" x="602" y="-1166.67" font-family="Times Roman,serif" font-size="10.00">AAACT</text>
-<polygon fill="#218559" stroke="#218559" points="593,-1148 593,-1162 644,-1162 644,-1148 593,-1148"/>
-<text text-anchor="start" x="603.5" y="-1152.67" font-family="Times Roman,serif" font-size="10.00">AGTTT</text>
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-<g id="edge292" class="edge"><title>24,2&#45;&gt;25,1</title>
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-<ellipse fill="none" stroke="black" cx="484" cy="-4629" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="464.5" y="-4640.17" font-family="Times Roman,serif" font-size="10.00">7,1&#45;&#45;null</text>
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-<text text-anchor="start" x="467.5" y="-4611.67" font-family="Times Roman,serif" font-size="10.00">TGAAA</text>
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-<text text-anchor="start" x="461.5" y="-5227.17" font-family="Times Roman,serif" font-size="10.00">19,4&#45;&#45;null</text>
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-<!-- 24,2&#45;&gt;19,4 -->
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-<ellipse fill="none" stroke="black" cx="886" cy="-5120" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="863.5" y="-5131.17" font-family="Times Roman,serif" font-size="10.00">24,4&#45;&#45;null</text>
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-<text text-anchor="start" x="870.5" y="-5116.67" font-family="Times Roman,serif" font-size="10.00">AACTA</text>
-<polygon fill="#218559" stroke="#218559" points="861,-5098 861,-5112 912,-5112 912,-5098 861,-5098"/>
-<text text-anchor="start" x="872" y="-5102.67" font-family="Times Roman,serif" font-size="10.00">TAGTT</text>
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-<!-- 24,3&#45;&gt;24,4 -->
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-<ellipse fill="none" stroke="black" cx="350" cy="-4725" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="327.5" y="-4736.17" font-family="Times Roman,serif" font-size="10.00">23,1&#45;&#45;null</text>
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-<text text-anchor="start" x="336" y="-4721.67" font-family="Times Roman,serif" font-size="10.00">GTTTC</text>
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-<text text-anchor="start" x="333" y="-4707.67" font-family="Times Roman,serif" font-size="10.00">GAAAC</text>
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-<!-- 24,3&#45;&gt;23,1 -->
-<g id="edge304" class="edge"><title>24,3&#45;&gt;23,1</title>
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-<text text-anchor="start" x="871.5" y="-1152.67" font-family="Times Roman,serif" font-size="10.00">ATAGT</text>
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-<!-- 24,4&#45;&gt;25,3 -->
-<g id="edge308" class="edge"><title>24,4&#45;&gt;25,3</title>
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-<text text-anchor="start" x="738" y="-1152.67" font-family="Times Roman,serif" font-size="10.00">TAGTT</text>
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-<!-- 25,1&#45;&gt;25,2 -->
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-<path fill="none" stroke="#dd1e2f" d="M664.867,-1163.53C674.501,-1163.25 684.748,-1163.18 694.703,-1163.31"/>
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-<text text-anchor="start" x="871.5" y="-2384.67" font-family="Times Roman,serif" font-size="10.00">ACTAT</text>
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-<g id="edge724" class="edge"><title>25,2&#45;&gt;26,4</title>
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-<ellipse fill="none" stroke="black" cx="1020" cy="-1170" rx="46.8775" ry="36.0624"/>
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-<!-- 26,2 -->
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-<!-- 25,4&#45;&gt;26,2 -->
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-<!-- 26,1&#45;&gt;26,2 -->
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-<!-- 26,1&#45;&gt;27,3 -->
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-<!-- 26,2&#45;&gt;25,4 -->
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-<!-- 26,2&#45;&gt;26,1 -->
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-<!-- 26,2&#45;&gt;26,3 -->
-<g id="edge316" class="edge"><title>26,2&#45;&gt;26,3</title>
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-<!-- 26,3&#45;&gt;26,2 -->
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-<!-- 26,3&#45;&gt;26,4 -->
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-<!-- 27,1 -->
-<g id="node30" class="node"><title>27,1</title>
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-<!-- 26,3&#45;&gt;27,1 -->
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-<!-- 27,1&#45;&gt;27,2 -->
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-<!-- 27,2&#45;&gt;27,1 -->
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-<!-- 27,2&#45;&gt;27,3 -->
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-<!-- 27,2&#45;&gt;28,1 -->
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-<!-- 27,3&#45;&gt;27,4 -->
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-<!-- 22,4 -->
-<g id="node48" class="node"><title>22,4</title>
-<ellipse fill="none" stroke="black" cx="886" cy="-3234" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="863.5" y="-3245.17" font-family="Times Roman,serif" font-size="10.00">22,4&#45;&#45;null</text>
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-<text text-anchor="start" x="871.5" y="-3216.67" font-family="Times Roman,serif" font-size="10.00">TTCAC</text>
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-<!-- 22,3&#45;&gt;22,4 -->
-<g id="edge268" class="edge"><title>22,3&#45;&gt;22,4</title>
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-<!-- 22,4&#45;&gt;22,3 -->
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-<text text-anchor="start" x="461.5" y="-4736.17" font-family="Times Roman,serif" font-size="10.00">23,2&#45;&#45;null</text>
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-<text text-anchor="start" x="470" y="-4721.67" font-family="Times Roman,serif" font-size="10.00">TTTCA</text>
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-<!-- 22,4&#45;&gt;23,2 -->
-<g id="edge274" class="edge"><title>22,4&#45;&gt;23,2</title>
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-<!-- 23,1&#45;&gt;7,1 -->
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-<!-- 17,2 -->
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-<text text-anchor="start" x="461.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,2&#45;&#45;null</text>
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-<text text-anchor="start" x="469.5" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">CGTTT</text>
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-<!-- 23,1&#45;&gt;17,2 -->
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-<!-- 23,1&#45;&gt;19,4 -->
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-<text text-anchor="start" x="193.5" y="-4474.17" font-family="Times Roman,serif" font-size="10.00">18,1&#45;&#45;null</text>
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-<text text-anchor="start" x="201.5" y="-4459.67" font-family="Times Roman,serif" font-size="10.00">CGTTT</text>
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-<text text-anchor="start" x="199" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">AAACG</text>
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-<!-- 23,1&#45;&gt;18,1 -->
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-<!-- 23,2&#45;&gt;22,4 -->
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-<!-- 23,2&#45;&gt;23,3 -->
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-<polygon fill="#218559" stroke="#218559" points="540.937,-4728.18 530.867,-4731.47 540.792,-4735.18 540.937,-4728.18"/>
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-<!-- 23,3&#45;&gt;23,4 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-4721.82 704.933,-4718.52 695.007,-4714.82 694.864,-4721.82"/>
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-<!-- 23,4&#45;&gt;22,2 -->
-<g id="edge714" class="edge"><title>23,4&#45;&gt;22,2</title>
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-<!-- 23,4&#45;&gt;23,3 -->
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-<!-- 28,1&#45;&gt;27,2 -->
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-<g id="edge332" class="edge"><title>28,1&#45;&gt;22,1</title>
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-<!-- 28,2 -->
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-<text text-anchor="start" x="736.5" y="-2722.67" font-family="Times Roman,serif" font-size="10.00">ACGTA</text>
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-<!-- 28,1&#45;&gt;28,2 -->
-<g id="edge334" class="edge"><title>28,1&#45;&gt;28,2</title>
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-<g id="edge342" class="edge"><title>28,2&#45;&gt;28,1</title>
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-<text text-anchor="start" x="1138.5" y="-2288.67" font-family="Times Roman,serif" font-size="10.00">ACGTC</text>
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-<!-- 28,2&#45;&gt;29,4 -->
-<g id="edge340" class="edge"><title>28,2&#45;&gt;29,4</title>
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-<!-- 28,3&#45;&gt;28,4 -->
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-<!-- 29,2 -->
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-<!-- 29,2&#45;&gt;29,3 -->
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-<!-- 29,2&#45;&gt;32,4 -->
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-<!-- 29,3&#45;&gt;30,1 -->
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-<!-- 1,4&#45;&gt;1,3 -->
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-<!-- 1,4&#45;&gt;2,2 -->
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-<!-- 3,1 -->
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-<!-- 3,2 -->
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-<polygon fill="#218559" stroke="#218559" points="730,-30 730,-44 775,-44 775,-30 730,-30"/>
-<text text-anchor="start" x="736" y="-34.6667" font-family="Times Roman,serif" font-size="10.00">CCTAG</text>
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-<!-- 3,1&#45;&gt;3,2 -->
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-<!-- 3,2&#45;&gt;3,3 -->
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-<!-- 3,3&#45;&gt;3,4 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="967.326,-48.8907 977.417,-45.6653 967.517,-41.8933 967.326,-48.8907"/>
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-<!-- 2,2&#45;&gt;1,4 -->
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-<!-- 2,3&#45;&gt;2,2 -->
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-<!-- 5,1&#45;&gt;5,2 -->
-<g id="edge484" class="edge"><title>5,1&#45;&gt;5,2</title>
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-<!-- 5,3&#45;&gt;5,4 -->
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-<text text-anchor="start" x="602.5" y="-3127.67" font-family="Times Roman,serif" font-size="10.00">GTTGC</text>
-<polygon fill="#218559" stroke="#218559" points="596,-3109 596,-3123 641,-3123 641,-3109 596,-3109"/>
-<text text-anchor="start" x="601" y="-3113.67" font-family="Times Roman,serif" font-size="10.00">GCAAC</text>
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-<!-- 5,3&#45;&gt;6,1 -->
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-<g id="node86" class="node"><title>4,2</title>
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-<text text-anchor="start" x="1000.5" y="-1455.17" font-family="Times Roman,serif" font-size="10.00">4,2&#45;&#45;null</text>
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-<text text-anchor="start" x="1004" y="-1426.67" font-family="Times Roman,serif" font-size="10.00">ACCCT</text>
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-<!-- 5,4&#45;&gt;4,2 -->
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-<g id="node85" class="node"><title>4,1</title>
-<ellipse fill="none" stroke="black" cx="886" cy="-1444" rx="43.1335" ry="36.0624"/>
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-<text text-anchor="start" x="868" y="-1440.67" font-family="Times Roman,serif" font-size="10.00">GAGGG</text>
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-<text text-anchor="start" x="870.5" y="-1426.67" font-family="Times Roman,serif" font-size="10.00">CCCTC</text>
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-<!-- 4,1&#45;&gt;4,2 -->
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-<path fill="none" stroke="#dd1e2f" d="M928.398,-1437.67C940.741,-1437.23 954.377,-1437.14 967.273,-1437.39"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="967.326,-1440.89 977.417,-1437.67 967.517,-1433.89 967.326,-1440.89"/>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="1101.33,-1440.89 1111.42,-1437.67 1101.52,-1433.89 1101.33,-1440.89"/>
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-<g id="edge74" class="edge"><title>4,3&#45;&gt;3,4</title>
-<path fill="none" stroke="#218559" d="M1148.63,-1408C1136.11,-1323.98 1106,-1122 1106,-1122 1106,-1122 1088,-453 1088,-453 1088,-453 1045.65,-203.273 1027.79,-97.9643"/>
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-<!-- 4,3&#45;&gt;4,2 -->
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-<path fill="none" stroke="#218559" d="M1111.42,-1450.33C1099.06,-1450.77 1085.42,-1450.86 1072.54,-1450.61"/>
-<polygon fill="#218559" stroke="#218559" points="1072.49,-1447.11 1062.4,-1450.33 1072.3,-1454.1 1072.49,-1447.11"/>
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-<!-- 4,3&#45;&gt;4,4 -->
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-<path fill="none" stroke="#dd1e2f" d="M1196.4,-1437.67C1208.74,-1437.23 1222.38,-1437.14 1235.27,-1437.39"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="1235.33,-1440.89 1245.42,-1437.67 1235.52,-1433.89 1235.33,-1440.89"/>
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-<!-- 4,4&#45;&gt;5,2 -->
-<g id="edge78" class="edge"><title>4,4&#45;&gt;5,2</title>
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-<!-- 4,4&#45;&gt;4,3 -->
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-<!-- 7,1&#45;&gt;24,2 -->
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-<!-- 7,1&#45;&gt;23,1 -->
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-<path fill="none" stroke="#218559" d="M451.161,-4652.53C433.641,-4665.08 411.867,-4680.68 393.012,-4694.19"/>
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-<!-- 7,1&#45;&gt;7,2 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="565.326,-4625.89 575.417,-4622.67 565.517,-4618.89 565.326,-4625.89"/>
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-<g id="node107" class="node"><title>8,3</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-5024" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="598.5" y="-5035.17" font-family="Times Roman,serif" font-size="10.00">8,3&#45;&#45;null</text>
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-<text text-anchor="start" x="602" y="-5020.67" font-family="Times Roman,serif" font-size="10.00">GAAAT</text>
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-<text text-anchor="start" x="604.5" y="-5006.67" font-family="Times Roman,serif" font-size="10.00">ATTTC</text>
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-<!-- 7,1&#45;&gt;8,3 -->
-<g id="edge506" class="edge"><title>7,1&#45;&gt;8,3</title>
-<path fill="none" stroke="#06a2cb" d="M513.64,-4602.54C527.072,-4590.54 540,-4579 540,-4579 540,-4579 550,-4340 550,-4340 550,-4340 552,-4340 552,-4340 552,-4340 562,-4773 562,-4773 562,-4773 591.791,-4906.53 607.915,-4978.8"/>
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-<g id="node156" class="node"><title>18,2</title>
-<ellipse fill="none" stroke="black" cx="350" cy="-4463" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="327.5" y="-4474.17" font-family="Times Roman,serif" font-size="10.00">18,2&#45;&#45;null</text>
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-<text text-anchor="start" x="333" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">GAAAC</text>
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-<!-- 7,1&#45;&gt;18,2 -->
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-<g id="edge518" class="edge"><title>7,2&#45;&gt;24,1</title>
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-<!-- 7,2&#45;&gt;7,1 -->
-<g id="edge520" class="edge"><title>7,2&#45;&gt;7,1</title>
-<path fill="none" stroke="#218559" d="M575.417,-4635.33C563.062,-4635.77 549.424,-4635.86 536.535,-4635.61"/>
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-<text text-anchor="start" x="732.5" y="-4640.17" font-family="Times Roman,serif" font-size="10.00">7,3&#45;&#45;null</text>
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-<text text-anchor="start" x="735.5" y="-4611.67" font-family="Times Roman,serif" font-size="10.00">GCTGA</text>
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-<!-- 7,2&#45;&gt;7,3 -->
-<g id="edge514" class="edge"><title>7,2&#45;&gt;7,3</title>
-<path fill="none" stroke="#dd1e2f" d="M660.398,-4622.67C672.741,-4622.23 686.377,-4622.14 699.273,-4622.39"/>
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-<ellipse fill="none" stroke="black" cx="1020" cy="-3131" rx="43.1335" ry="36.0624"/>
-<text text-anchor="start" x="1000.5" y="-3142.17" font-family="Times Roman,serif" font-size="10.00">6,4&#45;&#45;null</text>
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-<text text-anchor="start" x="1003.5" y="-3127.67" font-family="Times Roman,serif" font-size="10.00">GCTGA</text>
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-<text text-anchor="start" x="1004" y="-3113.67" font-family="Times Roman,serif" font-size="10.00">TCAGC</text>
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-<!-- 7,2&#45;&gt;6,4 -->
-<g id="edge516" class="edge"><title>7,2&#45;&gt;6,4</title>
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-<path fill="none" stroke="#218559" d="M709.417,-4635.33C697.062,-4635.77 683.424,-4635.86 670.535,-4635.61"/>
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-<!-- 7,3&#45;&gt;7,4 -->
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-<path fill="none" stroke="#dd1e2f" d="M794.398,-4622.67C806.741,-4622.23 820.377,-4622.14 833.273,-4622.39"/>
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-<text text-anchor="start" x="332.5" y="-642.667" font-family="Times Roman,serif" font-size="10.00">GCCAG</text>
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-<g id="node111" class="node"><title>11,2</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-660" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">11,2&#45;&#45;null</text>
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-</g>
-<!-- 11,1&#45;&gt;11,2 -->
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-<!-- 12,2 -->
-<g id="node126" class="node"><title>12,2</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-564" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-575.167" font-family="Times Roman,serif" font-size="10.00">12,2&#45;&#45;null</text>
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-<text text-anchor="start" x="468.5" y="-560.667" font-family="Times Roman,serif" font-size="10.00">TCTGG</text>
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-<!-- 11,1&#45;&gt;12,2 -->
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-<!-- 11,2&#45;&gt;11,1 -->
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-<path fill="none" stroke="#218559" d="M436.933,-666.477C427.29,-666.749 417.041,-666.817 407.091,-666.684"/>
-<polygon fill="#218559" stroke="#218559" points="406.937,-663.18 396.867,-666.471 406.792,-670.179 406.937,-663.18"/>
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-<!-- 11,3 -->
-<g id="node112" class="node"><title>11,3</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-660" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">11,3&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="593,-652 593,-666 644,-666 644,-652 593,-652"/>
-<text text-anchor="start" x="600.5" y="-656.667" font-family="Times Roman,serif" font-size="10.00">GGCAG</text>
-<polygon fill="#218559" stroke="#218559" points="593,-638 593,-652 644,-652 644,-638 593,-638"/>
-<text text-anchor="start" x="601.5" y="-642.667" font-family="Times Roman,serif" font-size="10.00">CTGCC</text>
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-<!-- 11,2&#45;&gt;11,3 -->
-<g id="edge558" class="edge"><title>11,2&#45;&gt;11,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-653.529C540.501,-653.254 550.748,-653.183 560.703,-653.313"/>
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-<g id="node115" class="node"><title>10,1</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-3035" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-3046.17" font-family="Times Roman,serif" font-size="10.00">10,1&#45;&#45;null</text>
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-<text text-anchor="start" x="466.5" y="-3031.67" font-family="Times Roman,serif" font-size="10.00">GGCAG</text>
-<polygon fill="#218559" stroke="#218559" points="459,-3013 459,-3027 510,-3027 510,-3013 459,-3013"/>
-<text text-anchor="start" x="467.5" y="-3017.67" font-family="Times Roman,serif" font-size="10.00">CTGCC</text>
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-<!-- 11,2&#45;&gt;10,1 -->
-<g id="edge556" class="edge"><title>11,2&#45;&gt;10,1</title>
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-<g id="edge566" class="edge"><title>11,3&#45;&gt;11,2</title>
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-<polygon fill="#218559" stroke="#218559" points="540.937,-663.18 530.867,-666.471 540.792,-670.179 540.937,-663.18"/>
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-<!-- 11,4 -->
-<g id="node113" class="node"><title>11,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-660" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">11,4&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="727,-652 727,-666 778,-666 778,-652 727,-652"/>
-<text text-anchor="start" x="734.5" y="-656.667" font-family="Times Roman,serif" font-size="10.00">GCAGA</text>
-<polygon fill="#218559" stroke="#218559" points="727,-638 727,-652 778,-652 778,-638 727,-638"/>
-<text text-anchor="start" x="737" y="-642.667" font-family="Times Roman,serif" font-size="10.00">TCTGC</text>
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-<!-- 11,3&#45;&gt;11,4 -->
-<g id="edge562" class="edge"><title>11,3&#45;&gt;11,4</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-653.529C674.501,-653.254 684.748,-653.183 694.703,-653.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-656.817 704.933,-653.523 695.007,-649.819 694.864,-656.817"/>
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-<!-- 12,4 -->
-<g id="node128" class="node"><title>12,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-564" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-575.167" font-family="Times Roman,serif" font-size="10.00">12,4&#45;&#45;null</text>
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-<text text-anchor="start" x="735.5" y="-560.667" font-family="Times Roman,serif" font-size="10.00">TGGCA</text>
-<polygon fill="#218559" stroke="#218559" points="727,-542 727,-556 778,-556 778,-542 727,-542"/>
-<text text-anchor="start" x="735.5" y="-546.667" font-family="Times Roman,serif" font-size="10.00">TGCCA</text>
-</g>
-<!-- 11,3&#45;&gt;12,4 -->
-<g id="edge564" class="edge"><title>11,3&#45;&gt;12,4</title>
-<path fill="none" stroke="#218559" d="M655.58,-637.894C671.307,-628.643 686,-620 686,-620 686,-620 698.304,-609.561 712.286,-597.696"/>
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-<g id="edge570" class="edge"><title>11,4&#45;&gt;11,3</title>
-<path fill="none" stroke="#218559" d="M704.933,-666.477C695.29,-666.749 685.041,-666.817 675.091,-666.684"/>
-<polygon fill="#218559" stroke="#218559" points="674.937,-663.18 664.867,-666.471 674.792,-670.179 674.937,-663.18"/>
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-<ellipse fill="none" stroke="black" cx="752" cy="-3035" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-3046.17" font-family="Times Roman,serif" font-size="10.00">10,3&#45;&#45;null</text>
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-<text text-anchor="start" x="736" y="-3031.67" font-family="Times Roman,serif" font-size="10.00">CAGAT</text>
-<polygon fill="#218559" stroke="#218559" points="727,-3013 727,-3027 778,-3027 778,-3013 727,-3013"/>
-<text text-anchor="start" x="737" y="-3017.67" font-family="Times Roman,serif" font-size="10.00">ATCTG</text>
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-<!-- 11,4&#45;&gt;10,3 -->
-<g id="edge568" class="edge"><title>11,4&#45;&gt;10,3</title>
-<path fill="none" stroke="#dd1e2f" d="M720.07,-687.164C702.813,-701.845 685,-717 685,-717 685,-717 685,-2875 685,-2875 685,-2875 713.831,-2943.85 733.667,-2991.22"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="730.536,-2992.8 737.627,-3000.68 736.993,-2990.1 730.536,-2992.8"/>
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-<!-- 10,1&#45;&gt;11,2 -->
-<g id="edge128" class="edge"><title>10,1&#45;&gt;11,2</title>
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-<!-- 10,1&#45;&gt;10,2 -->
-<g id="edge126" class="edge"><title>10,1&#45;&gt;10,2</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-3028.53C540.501,-3028.25 550.748,-3028.18 560.703,-3028.31"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="560.864,-3031.82 570.933,-3028.52 561.007,-3024.82 560.864,-3031.82"/>
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-<g id="edge130" class="edge"><title>10,2&#45;&gt;9,1</title>
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-<!-- 10,2&#45;&gt;10,1 -->
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-<path fill="none" stroke="#218559" d="M570.933,-3041.48C561.29,-3041.75 551.041,-3041.82 541.091,-3041.68"/>
-<polygon fill="#218559" stroke="#218559" points="540.937,-3038.18 530.867,-3041.47 540.792,-3045.18 540.937,-3038.18"/>
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-<!-- 10,2&#45;&gt;10,3 -->
-<g id="edge132" class="edge"><title>10,2&#45;&gt;10,3</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-3028.53C674.501,-3028.25 684.748,-3028.18 694.703,-3028.31"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-3031.82 704.933,-3028.52 695.007,-3024.82 694.864,-3031.82"/>
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-<g id="edge138" class="edge"><title>10,3&#45;&gt;11,4</title>
-<path fill="none" stroke="#218559" d="M737.627,-3000.68C717.94,-2953.66 685,-2875 685,-2875 685,-2875 685,-717 685,-717 685,-717 697.917,-706.011 712.409,-693.682"/>
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-<!-- 10,3&#45;&gt;10,2 -->
-<g id="edge140" class="edge"><title>10,3&#45;&gt;10,2</title>
-<path fill="none" stroke="#218559" d="M704.933,-3041.48C695.29,-3041.75 685.041,-3041.82 675.091,-3041.68"/>
-<polygon fill="#218559" stroke="#218559" points="674.937,-3038.18 664.867,-3041.47 674.792,-3045.18 674.937,-3038.18"/>
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-<!-- 10,3&#45;&gt;10,4 -->
-<g id="edge136" class="edge"><title>10,3&#45;&gt;10,4</title>
-<path fill="none" stroke="#dd1e2f" d="M798.867,-3028.53C808.501,-3028.25 818.748,-3028.18 828.703,-3028.31"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="828.864,-3031.82 838.933,-3028.52 829.007,-3024.82 828.864,-3031.82"/>
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-<!-- 10,4&#45;&gt;9,3 -->
-<g id="edge142" class="edge"><title>10,4&#45;&gt;9,3</title>
-<path fill="none" stroke="#dd1e2f" d="M854.4,-3062.09C841.697,-3072.97 830,-3083 830,-3083 830,-3083 808,-3282 808,-3282 808,-3282 781.155,-3378.35 764.638,-3437.64"/>
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-<g id="edge144" class="edge"><title>10,4&#45;&gt;10,3</title>
-<path fill="none" stroke="#218559" d="M838.933,-3041.48C829.29,-3041.75 819.041,-3041.82 809.091,-3041.68"/>
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-<ellipse fill="none" stroke="black" cx="350" cy="-468" rx="46.8775" ry="36.0624"/>
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-<text text-anchor="start" x="336" y="-464.667" font-family="Times Roman,serif" font-size="10.00">ATCTC</text>
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-<text text-anchor="start" x="334" y="-450.667" font-family="Times Roman,serif" font-size="10.00">GAGAT</text>
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-<g id="node121" class="node"><title>13,2</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-468" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-479.167" font-family="Times Roman,serif" font-size="10.00">13,2&#45;&#45;null</text>
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-<text text-anchor="start" x="467" y="-450.667" font-family="Times Roman,serif" font-size="10.00">AGAGA</text>
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-<!-- 13,1&#45;&gt;13,2 -->
-<g id="edge572" class="edge"><title>13,1&#45;&gt;13,2</title>
-<path fill="none" stroke="#dd1e2f" d="M396.867,-461.529C406.501,-461.254 416.748,-461.183 426.703,-461.313"/>
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-<g id="node136" class="node"><title>14,2</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-372" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-383.167" font-family="Times Roman,serif" font-size="10.00">14,2&#45;&#45;null</text>
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-<!-- 13,1&#45;&gt;14,2 -->
-<g id="edge574" class="edge"><title>13,1&#45;&gt;14,2</title>
-<path fill="none" stroke="#218559" d="M387.58,-445.894C403.307,-436.643 418,-428 418,-428 418,-428 430.304,-417.561 444.286,-405.696"/>
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-<!-- 13,2&#45;&gt;13,1 -->
-<g id="edge580" class="edge"><title>13,2&#45;&gt;13,1</title>
-<path fill="none" stroke="#218559" d="M436.933,-474.477C427.29,-474.749 417.041,-474.817 407.091,-474.684"/>
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-<ellipse fill="none" stroke="black" cx="618" cy="-468" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-479.167" font-family="Times Roman,serif" font-size="10.00">13,3&#45;&#45;null</text>
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-<text text-anchor="start" x="603" y="-464.667" font-family="Times Roman,serif" font-size="10.00">CTCTG</text>
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-<text text-anchor="start" x="601" y="-450.667" font-family="Times Roman,serif" font-size="10.00">CAGAG</text>
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-<!-- 13,2&#45;&gt;13,3 -->
-<g id="edge578" class="edge"><title>13,2&#45;&gt;13,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-461.529C540.501,-461.254 550.748,-461.183 560.703,-461.313"/>
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-<ellipse fill="none" stroke="black" cx="350" cy="-564" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="327.5" y="-575.167" font-family="Times Roman,serif" font-size="10.00">12,1&#45;&#45;null</text>
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-<text text-anchor="start" x="335" y="-560.667" font-family="Times Roman,serif" font-size="10.00">CTCTG</text>
-<polygon fill="#218559" stroke="#218559" points="325,-542 325,-556 376,-556 376,-542 325,-542"/>
-<text text-anchor="start" x="333" y="-546.667" font-family="Times Roman,serif" font-size="10.00">CAGAG</text>
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-<!-- 13,2&#45;&gt;12,1 -->
-<g id="edge576" class="edge"><title>13,2&#45;&gt;12,1</title>
-<path fill="none" stroke="#dd1e2f" d="M452.16,-495.016C435.283,-509.336 418,-524 418,-524 418,-524 408.3,-529.706 396.227,-536.808"/>
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-<g id="edge586" class="edge"><title>13,3&#45;&gt;13,2</title>
-<path fill="none" stroke="#218559" d="M570.933,-474.477C561.29,-474.749 551.041,-474.817 541.091,-474.684"/>
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-<ellipse fill="none" stroke="black" cx="752" cy="-372" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-383.167" font-family="Times Roman,serif" font-size="10.00">14,4&#45;&#45;null</text>
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-<polygon fill="#218559" stroke="#218559" points="674.937,-471.18 664.867,-474.471 674.792,-478.179 674.937,-471.18"/>
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-<text text-anchor="start" x="595.5" y="-575.167" font-family="Times Roman,serif" font-size="10.00">12,3&#45;&#45;null</text>
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-<text text-anchor="start" x="601.5" y="-560.667" font-family="Times Roman,serif" font-size="10.00">CTGGC</text>
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-<text text-anchor="start" x="600.5" y="-546.667" font-family="Times Roman,serif" font-size="10.00">GCCAG</text>
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-<!-- 13,4&#45;&gt;12,3 -->
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-<polygon fill="#218559" stroke="#218559" points="443.227,-501.516 449.317,-492.847 439.15,-495.826 443.227,-501.516"/>
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-<!-- 12,1&#45;&gt;12,2 -->
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-<polygon fill="#218559" stroke="#218559" points="406.937,-567.18 396.867,-570.471 406.792,-574.179 406.937,-567.18"/>
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-<!-- 12,2&#45;&gt;12,3 -->
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-<path fill="none" stroke="#218559" d="M652.857,-539.028C670.072,-526.694 690.998,-511.703 709.18,-498.677"/>
-<polygon fill="#218559" stroke="#218559" points="711.227,-501.516 717.317,-492.847 707.15,-495.826 711.227,-501.516"/>
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-<!-- 12,3&#45;&gt;12,2 -->
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-<polygon fill="#218559" stroke="#218559" points="540.937,-567.18 530.867,-570.471 540.792,-574.179 540.937,-567.18"/>
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-<!-- 12,3&#45;&gt;12,4 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-560.817 704.933,-557.523 695.007,-553.819 694.864,-560.817"/>
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-<!-- 12,4&#45;&gt;11,3 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="658.948,-626.359 652.857,-635.028 663.025,-632.049 658.948,-626.359"/>
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-<!-- 12,4&#45;&gt;12,3 -->
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-<polygon fill="#218559" stroke="#218559" points="674.937,-567.18 664.867,-570.471 674.792,-574.179 674.937,-567.18"/>
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-<!-- 15,1 -->
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-<!-- 15,2 -->
-<g id="node131" class="node"><title>15,2</title>
-<ellipse fill="none" stroke="black" cx="484" cy="-276" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-287.167" font-family="Times Roman,serif" font-size="10.00">15,2&#45;&#45;null</text>
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-<text text-anchor="start" x="468" y="-258.667" font-family="Times Roman,serif" font-size="10.00">ATGCC</text>
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-<!-- 15,1&#45;&gt;15,2 -->
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-<!-- 16,2 -->
-<g id="node146" class="node"><title>16,2</title>
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-<text text-anchor="start" x="461.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,2&#45;&#45;null</text>
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-<!-- 15,1&#45;&gt;16,2 -->
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-<!-- 15,2&#45;&gt;15,1 -->
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-<path fill="none" stroke="#218559" d="M436.933,-282.477C427.29,-282.749 417.041,-282.817 407.091,-282.684"/>
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-<!-- 15,3 -->
-<g id="node132" class="node"><title>15,3</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-276" rx="46.8775" ry="36.0624"/>
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-<text text-anchor="start" x="602" y="-258.667" font-family="Times Roman,serif" font-size="10.00">GATGC</text>
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-<!-- 15,2&#45;&gt;15,3 -->
-<g id="edge598" class="edge"><title>15,2&#45;&gt;15,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-269.529C540.501,-269.254 550.748,-269.183 560.703,-269.313"/>
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-<!-- 14,1 -->
-<g id="node135" class="node"><title>14,1</title>
-<ellipse fill="none" stroke="black" cx="350" cy="-372" rx="46.8775" ry="36.0624"/>
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-<!-- 15,2&#45;&gt;14,1 -->
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-<!-- 15,3&#45;&gt;15,2 -->
-<g id="edge606" class="edge"><title>15,3&#45;&gt;15,2</title>
-<path fill="none" stroke="#218559" d="M570.933,-282.477C561.29,-282.749 551.041,-282.817 541.091,-282.684"/>
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-<!-- 15,4 -->
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-<ellipse fill="none" stroke="black" cx="752" cy="-276" rx="46.8775" ry="36.0624"/>
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-<text text-anchor="start" x="736" y="-258.667" font-family="Times Roman,serif" font-size="10.00">AGATG</text>
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-<!-- 15,3&#45;&gt;15,4 -->
-<g id="edge602" class="edge"><title>15,3&#45;&gt;15,4</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-269.529C674.501,-269.254 684.748,-269.183 694.703,-269.313"/>
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-<!-- 16,4 -->
-<g id="node148" class="node"><title>16,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-148" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,4&#45;&#45;null</text>
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-<!-- 15,3&#45;&gt;16,4 -->
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-<path fill="none" stroke="#218559" d="M652.398,-250.707C669.265,-238.305 686,-226 686,-226 686,-226 702.96,-205.956 719.686,-186.19"/>
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-<!-- 15,4&#45;&gt;15,3 -->
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-<ellipse fill="none" stroke="black" cx="618" cy="-372" rx="46.8775" ry="36.0624"/>
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-<text text-anchor="start" x="602" y="-354.667" font-family="Times Roman,serif" font-size="10.00">GAGAT</text>
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-<!-- 15,4&#45;&gt;14,3 -->
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-<!-- 14,1&#45;&gt;14,2 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-368.817 704.933,-365.523 695.007,-361.819 694.864,-368.817"/>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="658.948,-434.359 652.857,-443.028 663.025,-440.049 658.948,-434.359"/>
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-<!-- 14,4&#45;&gt;14,3 -->
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-<polygon fill="#218559" stroke="#218559" points="674.937,-375.18 664.867,-378.471 674.792,-382.179 674.937,-375.18"/>
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-<!-- 17,1&#45;&gt;24,1 -->
-<g id="edge618" class="edge"><title>17,1&#45;&gt;24,1</title>
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-<!-- 17,1&#45;&gt;23,2 -->
-<g id="edge614" class="edge"><title>17,1&#45;&gt;23,2</title>
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-<!-- 17,1&#45;&gt;17,2 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="426.864,-3944.82 436.933,-3941.52 427.007,-3937.82 426.864,-3944.82"/>
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-<!-- 18,3 -->
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-<ellipse fill="none" stroke="black" cx="484" cy="-4463" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="461.5" y="-4474.17" font-family="Times Roman,serif" font-size="10.00">18,3&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="459,-4455 459,-4469 510,-4469 510,-4455 459,-4455"/>
-<text text-anchor="start" x="470" y="-4459.67" font-family="Times Roman,serif" font-size="10.00">TTTCA</text>
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-<text text-anchor="start" x="467.5" y="-4445.67" font-family="Times Roman,serif" font-size="10.00">TGAAA</text>
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-<!-- 17,1&#45;&gt;18,3 -->
-<g id="edge616" class="edge"><title>17,1&#45;&gt;18,3</title>
-<path fill="none" stroke="#06a2cb" d="M363.197,-3913.41C382.458,-3862.92 416,-3775 416,-3775 416,-3775 418,-3775 418,-3775 418,-3775 428,-4162 428,-4162 428,-4162 459.813,-4333 475.483,-4417.22"/>
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-<!-- 17,2&#45;&gt;23,1 -->
-<g id="edge624" class="edge"><title>17,2&#45;&gt;23,1</title>
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-<!-- 17,2&#45;&gt;17,1 -->
-<g id="edge626" class="edge"><title>17,2&#45;&gt;17,1</title>
-<path fill="none" stroke="#218559" d="M436.933,-3954.48C427.29,-3954.75 417.041,-3954.82 407.091,-3954.68"/>
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-<!-- 17,3 -->
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-<ellipse fill="none" stroke="black" cx="618" cy="-3948" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,3&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="593,-3940 593,-3954 644,-3954 644,-3940 593,-3940"/>
-<text text-anchor="start" x="600.5" y="-3944.67" font-family="Times Roman,serif" font-size="10.00">AACGG</text>
-<polygon fill="#218559" stroke="#218559" points="593,-3926 593,-3940 644,-3940 644,-3926 593,-3926"/>
-<text text-anchor="start" x="603" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">CCGTT</text>
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-<!-- 17,2&#45;&gt;17,3 -->
-<g id="edge622" class="edge"><title>17,2&#45;&gt;17,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-3941.53C540.501,-3941.25 550.748,-3941.18 560.703,-3941.31"/>
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-<!-- 16,1 -->
-<g id="node145" class="node"><title>16,1</title>
-<ellipse fill="none" stroke="black" cx="350" cy="-148" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="327.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,1&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="325,-140 325,-154 376,-154 376,-140 325,-140"/>
-<text text-anchor="start" x="332.5" y="-144.667" font-family="Times Roman,serif" font-size="10.00">AACGG</text>
-<polygon fill="#218559" stroke="#218559" points="325,-126 325,-140 376,-140 376,-126 325,-126"/>
-<text text-anchor="start" x="335" y="-130.667" font-family="Times Roman,serif" font-size="10.00">CCGTT</text>
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-<!-- 17,2&#45;&gt;16,1 -->
-<g id="edge620" class="edge"><title>17,2&#45;&gt;16,1</title>
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-<!-- 17,3&#45;&gt;17,2 -->
-<g id="edge632" class="edge"><title>17,3&#45;&gt;17,2</title>
-<path fill="none" stroke="#218559" d="M570.933,-3954.48C561.29,-3954.75 551.041,-3954.82 541.091,-3954.68"/>
-<polygon fill="#218559" stroke="#218559" points="540.937,-3951.18 530.867,-3954.47 540.792,-3958.18 540.937,-3951.18"/>
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-<!-- 17,4 -->
-<g id="node143" class="node"><title>17,4</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-3948" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-3959.17" font-family="Times Roman,serif" font-size="10.00">17,4&#45;&#45;null</text>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="727,-3940 727,-3954 778,-3954 778,-3940 727,-3940"/>
-<text text-anchor="start" x="734.5" y="-3944.67" font-family="Times Roman,serif" font-size="10.00">ACGGC</text>
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-<text text-anchor="start" x="735.5" y="-3930.67" font-family="Times Roman,serif" font-size="10.00">GCCGT</text>
-</g>
-<!-- 17,3&#45;&gt;17,4 -->
-<g id="edge628" class="edge"><title>17,3&#45;&gt;17,4</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-3941.53C674.501,-3941.25 684.748,-3941.18 694.703,-3941.31"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-3944.82 704.933,-3941.52 695.007,-3937.82 694.864,-3944.82"/>
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-<!-- 17,3&#45;&gt;18,1 -->
-<g id="edge630" class="edge"><title>17,3&#45;&gt;18,1</title>
-<path fill="none" stroke="#06a2cb" d="M610.036,-3912.3C594.575,-3843.01 562,-3697 562,-3697 562,-3697 540,-3435 540,-3435 540,-3435 428,-3435 428,-3435 428,-3435 398,-3652 398,-3652 398,-3652 294,-3903 294,-3903 294,-3903 264,-4162 264,-4162 264,-4162 236.799,-4332.57 223.35,-4416.91"/>
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-<!-- 17,4&#45;&gt;17,3 -->
-<g id="edge636" class="edge"><title>17,4&#45;&gt;17,3</title>
-<path fill="none" stroke="#218559" d="M704.933,-3954.48C695.29,-3954.75 685.041,-3954.82 675.091,-3954.68"/>
-<polygon fill="#218559" stroke="#218559" points="674.937,-3951.18 664.867,-3954.47 674.792,-3958.18 674.937,-3951.18"/>
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-<!-- 16,3 -->
-<g id="node147" class="node"><title>16,3</title>
-<ellipse fill="none" stroke="black" cx="618" cy="-148" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="595.5" y="-159.167" font-family="Times Roman,serif" font-size="10.00">16,3&#45;&#45;null</text>
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-<text text-anchor="start" x="600.5" y="-144.667" font-family="Times Roman,serif" font-size="10.00">CGGCA</text>
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-<text text-anchor="start" x="601.5" y="-130.667" font-family="Times Roman,serif" font-size="10.00">TGCCG</text>
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-<!-- 17,4&#45;&gt;16,3 -->
-<g id="edge634" class="edge"><title>17,4&#45;&gt;16,3</title>
-<path fill="none" stroke="#dd1e2f" d="M744.036,-3912.3C728.575,-3843.01 696,-3697 696,-3697 696,-3697 686,-1855 686,-1855 686,-1855 674,-228 674,-228 674,-228 660.245,-208.35 646.369,-188.527"/>
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-<!-- 16,1&#45;&gt;17,2 -->
-<g id="edge188" class="edge"><title>16,1&#45;&gt;17,2</title>
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-<!-- 16,1&#45;&gt;16,2 -->
-<g id="edge186" class="edge"><title>16,1&#45;&gt;16,2</title>
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-<!-- 16,2&#45;&gt;15,1 -->
-<g id="edge190" class="edge"><title>16,2&#45;&gt;15,1</title>
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="384.553,-238.154 379.739,-247.593 389.388,-243.216 384.553,-238.154"/>
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-<!-- 16,2&#45;&gt;16,1 -->
-<g id="edge194" class="edge"><title>16,2&#45;&gt;16,1</title>
-<path fill="none" stroke="#218559" d="M436.933,-154.477C427.29,-154.749 417.041,-154.817 407.091,-154.684"/>
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-<!-- 16,2&#45;&gt;16,3 -->
-<g id="edge192" class="edge"><title>16,2&#45;&gt;16,3</title>
-<path fill="none" stroke="#dd1e2f" d="M530.867,-141.529C540.501,-141.254 550.748,-141.183 560.703,-141.313"/>
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-<!-- 16,3&#45;&gt;17,4 -->
-<g id="edge198" class="edge"><title>16,3&#45;&gt;17,4</title>
-<path fill="none" stroke="#218559" d="M640.455,-180.078C656.034,-202.335 674,-228 674,-228 674,-228 696,-3697 696,-3697 696,-3697 725.714,-3830.18 741.853,-3902.52"/>
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-<!-- 16,3&#45;&gt;16,2 -->
-<g id="edge200" class="edge"><title>16,3&#45;&gt;16,2</title>
-<path fill="none" stroke="#218559" d="M570.933,-154.477C561.29,-154.749 551.041,-154.817 541.091,-154.684"/>
-<polygon fill="#218559" stroke="#218559" points="540.937,-151.18 530.867,-154.471 540.792,-158.179 540.937,-151.18"/>
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-<!-- 16,3&#45;&gt;16,4 -->
-<g id="edge196" class="edge"><title>16,3&#45;&gt;16,4</title>
-<path fill="none" stroke="#dd1e2f" d="M664.867,-141.529C674.501,-141.254 684.748,-141.183 694.703,-141.313"/>
-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="694.864,-144.817 704.933,-141.523 695.007,-137.819 694.864,-144.817"/>
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-<!-- 16,4&#45;&gt;15,3 -->
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-<path fill="none" stroke="#218559" d="M704.933,-154.477C695.29,-154.749 685.041,-154.817 675.091,-154.684"/>
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-<!-- 19,1&#45;&gt;20,3 -->
-<g id="edge640" class="edge"><title>19,1&#45;&gt;20,3</title>
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-<text text-anchor="start" x="201.5" y="-5198.67" font-family="Times Roman,serif" font-size="10.00">TCAAT</text>
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-<!-- 19,2&#45;&gt;19,1 -->
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-<text text-anchor="start" x="1004" y="-1714.67" font-family="Times Roman,serif" font-size="10.00">CATGA</text>
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-<!-- 30,3&#45;&gt;30,4 -->
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-<!-- 30,4&#45;&gt;30,3 -->
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-<!-- 37,1 -->
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-<!-- 37,2 -->
-<g id="node171" class="node"><title>37,2</title>
-<ellipse fill="none" stroke="black" cx="1154" cy="-660" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="1131.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">37,2&#45;&#45;null</text>
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-<text text-anchor="start" x="1137.5" y="-656.667" font-family="Times Roman,serif" font-size="10.00">CACAC</text>
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-<!-- 37,1&#45;&gt;37,2 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="1096.86,-656.817 1106.93,-653.523 1097.01,-649.819 1096.86,-656.817"/>
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-<polygon fill="#218559" stroke="#218559" points="1076.94,-663.18 1066.87,-666.471 1076.79,-670.179 1076.94,-663.18"/>
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-<!-- 37,3 -->
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-<text text-anchor="start" x="1265.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">37,3&#45;&#45;null</text>
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-<!-- 37,2&#45;&gt;37,3 -->
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-<polygon fill="#dd1e2f" stroke="#dd1e2f" points="1230.86,-656.817 1240.93,-653.523 1231.01,-649.819 1230.86,-656.817"/>
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-<g id="node178" class="node"><title>36,4</title>
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-<text text-anchor="start" x="1265.5" y="-1085.17" font-family="Times Roman,serif" font-size="10.00">36,4&#45;&#45;null</text>
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-<text text-anchor="start" x="1272.5" y="-1070.67" font-family="Times Roman,serif" font-size="10.00">CGTGT</text>
-<polygon fill="#218559" stroke="#218559" points="1263,-1052 1263,-1066 1314,-1066 1314,-1052 1263,-1052"/>
-<text text-anchor="start" x="1271" y="-1056.67" font-family="Times Roman,serif" font-size="10.00">ACACG</text>
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-<!-- 37,2&#45;&gt;36,4 -->
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-<polygon fill="#ebb035" stroke="#ebb035" points="1270.19,-1030.36 1276.6,-1038.79 1276.85,-1028.2 1270.19,-1030.36"/>
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-<!-- 37,3&#45;&gt;37,2 -->
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-<polygon fill="#218559" stroke="#218559" points="1210.94,-663.18 1200.87,-666.471 1210.79,-670.179 1210.94,-663.18"/>
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-<!-- 37,4 -->
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-<text text-anchor="start" x="1399.5" y="-671.167" font-family="Times Roman,serif" font-size="10.00">37,4&#45;&#45;null</text>
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-<text text-anchor="start" x="1405" y="-656.667" font-family="Times Roman,serif" font-size="10.00">CACGC</text>
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-<text text-anchor="start" x="1405" y="-642.667" font-family="Times Roman,serif" font-size="10.00">GCGTG</text>
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-<!-- 37,3&#45;&gt;37,4 -->
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-<!-- 37,4&#45;&gt;37,3 -->
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-<!-- 36,2 -->
-<g id="node176" class="node"><title>36,2</title>
-<ellipse fill="none" stroke="black" cx="1020" cy="-1074" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="997.5" y="-1085.17" font-family="Times Roman,serif" font-size="10.00">36,2&#45;&#45;null</text>
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-<text text-anchor="start" x="1004" y="-1056.67" font-family="Times Roman,serif" font-size="10.00">ACGCT</text>
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-<!-- 37,4&#45;&gt;36,2 -->
-<g id="edge876" class="edge"><title>37,4&#45;&gt;36,2</title>
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-<ellipse fill="none" stroke="black" cx="886" cy="-1074" rx="46.8775" ry="36.0624"/>
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-<!-- 36,1&#45;&gt;36,2 -->
-<g id="edge434" class="edge"><title>36,1&#45;&gt;36,2</title>
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-<!-- 35,3 -->
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-<!-- 36,1&#45;&gt;35,3 -->
-<g id="edge438" class="edge"><title>36,1&#45;&gt;35,3</title>
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-<g id="node192" class="node"><title>33,3</title>
-<ellipse fill="none" stroke="black" cx="752" cy="-1540" rx="46.8775" ry="36.0624"/>
-<text text-anchor="start" x="729.5" y="-1551.17" font-family="Times Roman,serif" font-size="10.00">33,3&#45;&#45;null</text>
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-<text text-anchor="start" x="737" y="-1536.67" font-family="Times Roman,serif" font-size="10.00">GCTTA</text>
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-<!-- 36,1&#45;&gt;33,3 -->
-<g id="edge436" class="edge"><title>36,1&#45;&gt;33,3</title>
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-<!-- 36,2&#45;&gt;36,3 -->
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-<!-- 35,4 -->
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-<!-- 35,3&#45;&gt;35,4 -->
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-<!-- 32,1 -->
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-<!-- 34,2 -->
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diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/bubble_test1.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/five_ff_bubbles.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/bubble_test1.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/five_ff_bubbles.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/text.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/five_length1_bubbles.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/text.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/five_length1_bubbles.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/fr_test.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/fr_bubble.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/fr_test.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/fr_bubble.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/fr_test2.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/fr_bubble_and_ff_bubble.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/fr_test2.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/fr_bubble_and_ff_bubble.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/rf_test.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/rf_bubble.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/rf_test.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/rf_bubble.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/tworeads.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/small_bubble.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/tworeads.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/small_bubble.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/tip_test1.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/tip_and_bubble.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/tip_test1.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/bubblemerge/tip_and_bubble.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/singleread.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/pathmerge/singleread.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/singleread.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/pathmerge/singleread.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/walk_random_seq1.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/synthetic/walk_random_seq1.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/walk_random_seq1.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/synthetic/walk_random_seq1.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/walk_random_seq2.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/synthetic/walk_random_seq2.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/walk_random_seq2.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/synthetic/walk_random_seq2.txt
diff --git a/genomix/genomix-hadoop/src/test/resources/data/sequence/fr_with_tip.txt b/genomix/genomix-hadoop/src/test/resources/input/reads/tipremove/fr_with_tip.txt
similarity index 100%
rename from genomix/genomix-hadoop/src/test/resources/data/sequence/fr_with_tip.txt
rename to genomix/genomix-hadoop/src/test/resources/input/reads/tipremove/fr_with_tip.txt