Merge remote-tracking branch 'origin/genomix/fullstack_genomix' into nanzhang/hyracks_genomix
# By Jake Biesinger
# Via Jake Biesinger
* origin/genomix/fullstack_genomix: (29 commits)
revert to previous initVertex behavior
try to have 2 local stes of CCs and NCs (-runLocal not working)
don't use a max number of readids on edges
Add full-pipeline counters
hadoop uses |IO_DIRS| * #slaves reducers
use $IO_DIRS, not -coresPerMachine for hyracks partitions + hadoop #reducers
Hadoop graphbuild works!
hadoop dist cache must be an absolute path
hadoop jar deployment fix
shut down previous clusters again
don't delete the default log directory on cluster shutdown
read additional ports from .properties; launch multiple CC's on one machine(?)
tweak cluster shutdown
read FRAME_SIZE and FRAME_LIMIT from cluster.properties
Use maven-built app.home when run from Eclipse (mus trun mvn package once)
fix shutdown bug when -runLocal=false
move scripts back (can't run non-local eclipse without mvn package)
move and chmod +x scripts in driver so eclipse can call the directly
runLocal is working but doesn't shut down properly
only shut down pregelix cluster if it's running
...