commit 8528899a8c2975016aecd6b1109cdadc236f910c
author Jianfeng Jia <jianfeng.jia@gmail.com> Mon May 27 08:42:03 2013 -0700
committer Jianfeng Jia <jianfeng.jia@gmail.com> Mon May 27 08:42:03 2013 -0700
tree 7a91fcac759e4d3c8bf884b466df3f087d12bf22
parent 983a7076e4b24cd421d16a3cd6987bc94275a2bc

finish framework

genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/hyracks/test/JobRunStepByStepTest.java

diff --git a/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/hyracks/test/JobRunStepByStepTest.java b/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/hyracks/test/JobRunStepByStepTest.java
index 8451567..58331b8 100644
--- a/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/hyracks/test/JobRunStepByStepTest.java
+++ b/genomix/genomix-hyracks/src/test/java/edu/uci/ics/genomix/hyracks/test/JobRunStepByStepTest.java
@@ -60,10 +60,10 @@
     @Test
     public void TestAll() throws Exception {
         TestReader();
-        TestGroupbyKmer();
-        TestMapKmerToRead();
-        TestGroupByReadID();
-        TestEndToEnd();
+//        TestGroupbyKmer();
+//        TestMapKmerToRead();
+//        TestGroupByReadID();
+//        TestEndToEnd();
     }
 
     public void TestReader() throws Exception {

genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt

diff --git a/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt b/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
index 13190dd..01c49e5 100755
--- a/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
+++ b/genomix/genomix-hyracks/src/test/resources/data/webmap/text.txt
@@ -1,6 +1,6 @@
 1	AATAGAAG

-2	AATAGAAG

+2	AATAGCTT

 3	AATAGAAG

-4	AATAGAAG

+4	AATAGCTT

 5	AATAGAAG

 6	AGAAGAAG